RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZNF34Q8IZ26 560 aa29.44■■■□□ 2.3
COL13A1-203ENST00000398969 MAGEB6Q8N7X4 407 aa29.44■■■□□ 2.3
COL13A1-203ENST00000398969 CICQ96RK0 1608 aaPredicted RBP29.44■■■□□ 2.3
COL13A1-203ENST00000398969 L2HGDHQ9H9P8 463 aa29.44■■■□□ 2.3
COL13A1-203ENST00000398969 USP21Q9UK80 565 aa29.44■■■□□ 2.3
COL13A1-203ENST00000398969 CBFA2T2O43439 604 aa29.43■■■□□ 2.3
COL13A1-203ENST00000398969 FOXP4Q8IVH2 680 aaPredicted RBP29.43■■■□□ 2.3
COL13A1-203ENST00000398969 TIAM2Q8IVF5 1701 aa29.43■■■□□ 2.3
COL13A1-203ENST00000398969 CHD4Q14839 1912 aa29.43■■■□□ 2.3
COL13A1-203ENST00000398969 SERPINC1P01008 464 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 KMT5BQ4FZB7 885 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 NOSTRINQ8IVI9 506 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 CNNM3Q8NE01 707 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 CNNM2Q9H8M5 875 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 DOCK2Q92608 1830 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 NID2Q14112 1375 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 IFNAR1P17181 557 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 MAP3K12Q12852 859 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 RASGRF1Q13972 1273 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 ELF2Q15723 593 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 OLFM4Q6UX06 510 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 SYT10Q6XYQ8 523 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 KRI1Q8N9T8 703 aaKnown RBP29.42■■■□□ 2.3
COL13A1-203ENST00000398969 ARMT1Q9H993 441 aa29.42■■■□□ 2.3
COL13A1-203ENST00000398969 MYH14Q7Z406 1995 aaKnown RBP29.41■■■□□ 2.3
COL13A1-203ENST00000398969 RREB1Q92766 1687 aa29.41■■■□□ 2.3
COL13A1-203ENST00000398969 AKNAD1Q5T1N1 836 aa29.41■■■□□ 2.3
COL13A1-203ENST00000398969 WASF1Q92558 559 aa29.41■■■□□ 2.3
COL13A1-203ENST00000398969 PCDHA5Q9Y5H7 936 aa29.41■■■□□ 2.3
COL13A1-203ENST00000398969 KRT23Q9C075 422 aa29.41■■■□□ 2.3
COL13A1-203ENST00000398969 GSG1L2A8MUP6 293 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 MYO1BO43795 1136 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 TUBB4AP04350 444 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 SLC5A1P13866 664 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 CFAP100Q494V2 611 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 STK11IPQ8N1F8 1099 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 MMP1P03956 469 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 GUCY1A2P33402 732 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 VSTM4Q8IW00 320 aa29.4■■■□□ 2.3
COL13A1-203ENST00000398969 MORC2Q9Y6X9 1032 aaPredicted RBP29.4■■■□□ 2.3
COL13A1-203ENST00000398969 BTBD18B2RXH4 712 aa29.39■■■□□ 2.3
COL13A1-203ENST00000398969 ELOA2Q8IYF1 753 aaPredicted RBP29.39■■■□□ 2.3
COL13A1-203ENST00000398969 CERKQ8TCT0 537 aa29.39■■■□□ 2.3
COL13A1-203ENST00000398969 FANCLQ9NW38 375 aa29.39■■■□□ 2.3
COL13A1-203ENST00000398969 TOB1P50616 345 aaPredicted RBP29.38■■■□□ 2.29
COL13A1-203ENST00000398969 MDM2Q00987 491 aaPredicted RBP29.38■■■□□ 2.29
COL13A1-203ENST00000398969 MFSD6Q6ZSS7 791 aa29.38■■■□□ 2.29
COL13A1-203ENST00000398969 TMX1Q9H3N1 280 aa29.38■■■□□ 2.29
COL13A1-203ENST00000398969 BMP6P22004 513 aa29.38■■■□□ 2.29
COL13A1-203ENST00000398969 CCDC93Q567U6 631 aa29.38■■■□□ 2.29
COL13A1-203ENST00000398969 FBXO38Q6PIJ6 1188 aa29.38■■■□□ 2.29
COL13A1-203ENST00000398969 FOXN1O15353 648 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 CCP110O43303 1012 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 SPECC1Q5M775 1068 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 DIS3L2Q8IYB7 885 aaKnown RBP29.37■■■□□ 2.29
COL13A1-203ENST00000398969 SNAP23O00161 211 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 PRKAB2O43741 272 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 CAMTA2O94983 1202 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 PDE4BQ07343 736 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 SAFBQ15424 915 aaKnown RBP eCLIP29.37■■■□□ 2.29
COL13A1-203ENST00000398969 STAG1Q8WVM7 1258 aa29.37■■■□□ 2.29
COL13A1-203ENST00000398969 KCNJ14Q9UNX9 436 aa29.36■■■□□ 2.29
COL13A1-203ENST00000398969 TMEM232C9JQI7 657 aa29.36■■■□□ 2.29
COL13A1-203ENST00000398969 RTN1Q16799 776 aa29.36■■■□□ 2.29
COL13A1-203ENST00000398969 TRIM22Q8IYM9 498 aa29.36■■■□□ 2.29
COL13A1-203ENST00000398969 FBXO2Q9UK22 296 aaPredicted RBP29.36■■■□□ 2.29
COL13A1-203ENST00000398969 RRP12Q5JTH9 1297 aaKnown RBP29.35■■■□□ 2.29
COL13A1-203ENST00000398969 LCORLQ8N3X6 602 aa29.35■■■□□ 2.29
COL13A1-203ENST00000398969 AK7Q96M32 723 aa29.35■■■□□ 2.29
COL13A1-203ENST00000398969 ZKSCAN3Q9BRR0 538 aa29.35■■■□□ 2.29
COL13A1-203ENST00000398969 TOP1P11387 765 aaKnown RBP29.34■■■□□ 2.29
COL13A1-203ENST00000398969 ETF1P62495 437 aaKnown RBP29.34■■■□□ 2.29
COL13A1-203ENST00000398969 HOMER1Q86YM7 354 aa29.34■■■□□ 2.29
COL13A1-203ENST00000398969 FOXP1Q9H334 677 aaPredicted RBP29.34■■■□□ 2.29
COL13A1-203ENST00000398969 HOOK1Q9UJC3 728 aaKnown RBP29.34■■■□□ 2.29
COL13A1-203ENST00000398969 ZHX1Q9UKY1 873 aaPredicted RBP29.34■■■□□ 2.29
COL13A1-203ENST00000398969 PTPREP23469 700 aa29.34■■■□□ 2.29
COL13A1-203ENST00000398969 TDO2P48775 406 aa29.34■■■□□ 2.29
COL13A1-203ENST00000398969 GRIN1Q05586 938 aa29.34■■■□□ 2.29
COL13A1-203ENST00000398969 WTAPQ15007 396 aa29.34■■■□□ 2.29
COL13A1-203ENST00000398969 INTS13Q9NVM9 706 aa29.34■■■□□ 2.29
COL13A1-203ENST00000398969 PNPLA7Q6ZV29 1317 aa29.34■■■□□ 2.29
COL13A1-203ENST00000398969 COL5A3P25940 1745 aaPredicted RBP29.34■■■□□ 2.29
COL13A1-203ENST00000398969 GNAT2P19087 354 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 SART3Q15020 963 aaKnown RBP29.33■■■□□ 2.29
COL13A1-203ENST00000398969 RILPL1Q5EBL4 403 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 SUSD4Q5VX71 490 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 NACAP1Q9BZK3 213 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 MAN1B1Q9UKM7 699 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 SLC4A4Q9Y6R1 1079 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 ZNF831Q5JPB2 1677 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 POSTNQ15063 836 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 TOMM22Q9NS69 142 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.33■■■□□ 2.29
COL13A1-203ENST00000398969 PHLPP2Q6ZVD8 1323 aa29.33■■■□□ 2.29
COL13A1-203ENST00000398969 PTF1AQ7RTS3 328 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 LRRN4CLQ8ND94 238 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 DEXIO95424 95 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 GOLGA8FQ08AF8 430 aa29.32■■■□□ 2.28
COL13A1-203ENST00000398969 GOLGA8DPQ0D2H9 430 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms