RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 HIF1AQ16665 826 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 LONRF3Q496Y0 759 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 ZNF280DQ6N043 979 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 ACAD11Q709F0 780 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 AMIGO3Q86WK7 504 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 RPUSD2Q8IZ73 545 aaKnown RBP4.22□□□□□ -1.73
XRCC4-203ENST00000396027 AGAP3Q96P47 875 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 NOL10Q9BSC4 688 aaKnown RBP4.22□□□□□ -1.73
XRCC4-203ENST00000396027 MTA3Q9BTC8 594 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 BATF3Q9NR55 127 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 ETAA1Q9NY74 926 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 TRAK1Q9UPV9 953 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 CTDP1Q9Y5B0 961 aaPredicted RBP4.22□□□□□ -1.73
XRCC4-203ENST00000396027 PTPRGP23470 1445 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 VPS8Q8N3P4 1428 aa4.22□□□□□ -1.73
XRCC4-203ENST00000396027 SERTM1A2A2V5 107 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 MYO1CO00159 1063 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 MBD3O95983 291 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 INHBBP09529 407 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 SESN3P58005 492 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 GPLD1P80108 840 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 LMNB2Q03252 620 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 NEDD9Q14511 834 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 PDIA5Q14554 519 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 NOLC1Q14978 699 aaKnown RBP eCLIP4.21□□□□□ -1.73
XRCC4-203ENST00000396027 ECM1Q16610 540 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 AMOTQ4VCS5 1084 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 CCDC38Q502W7 563 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 DNAJC21Q5F1R6 531 aaKnown RBP4.21□□□□□ -1.73
XRCC4-203ENST00000396027 CCDC181Q5TID7 509 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 KRBA2Q6ZNG9 492 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 NOL8Q76FK4 1167 aaKnown RBP4.21□□□□□ -1.73
XRCC4-203ENST00000396027 ANKRD13BQ86YJ7 626 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 CCDC50Q8IVM0 306 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 IL22RA1Q8N6P7 574 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 CCDC191Q8NCU4 936 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 ZNF397Q8NF99 534 aaPredicted RBP4.21□□□□□ -1.73
XRCC4-203ENST00000396027 ZCRB1Q8TBF4 217 aaKnown RBP4.21□□□□□ -1.73
XRCC4-203ENST00000396027 HSH2DQ96JZ2 352 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 STK31Q9BXU1 1019 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 ALG2Q9H553 416 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 FAM53CQ9NYF3 392 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 USP25Q9UHP3 1055 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 CTNNA3Q9UI47 895 aa4.21□□□□□ -1.73
XRCC4-203ENST00000396027 PLEKHH1Q9ULM0 1364 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 ELP1O95163 1332 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 WIZO95785 1651 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 NCOA2Q15596 1464 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 VIRMAQ69YN4 1812 aaKnown RBP4.21□□□□□ -1.74
XRCC4-203ENST00000396027 GOLGA6L9A6NEM1 432 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 HMMRO75330 724 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 RPS6KA5O75582 802 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 TUBBP07437 444 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 PAX7P23759 505 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 POLD1P28340 1107 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 COPB2P35606 906 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 BIRC2Q13490 618 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 ZNF792Q3KQV3 632 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 CRTC2Q53ET0 693 aaPredicted RBP4.21□□□□□ -1.74
XRCC4-203ENST00000396027 TEX11Q8IYF3 940 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 FAM9BQ8IZU0 186 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 SAMD3Q8N6K7 520 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 GBP7Q8N8V2 638 aaPredicted RBP4.21□□□□□ -1.74
XRCC4-203ENST00000396027 LZICQ8WZA0 190 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 SNX21Q969T3 373 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 KIF1BPQ96EK5 621 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 DTNBP1Q96EV8 351 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 BORCS6Q96GS4 357 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 SUSD3Q96L08 255 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 MPHOSPH6Q99547 160 aaKnown RBP4.21□□□□□ -1.74
XRCC4-203ENST00000396027 CRACR2AQ9BSW2 395 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 PANK2Q9BZ23 570 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 RABEP2Q9H5N1 569 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 NRDE2Q9H7Z3 1164 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 MYO6Q9UM54 1294 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 AKAP2Q9Y2D5 859 aa4.21□□□□□ -1.74
XRCC4-203ENST00000396027 CNTLNQ9NXG0 1405 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 MTUS2Q5JR59 1369 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 ERICH3Q5RHP9 1530 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 SMTNL1A8MU46 457 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 POLR3GO15318 223 aaPredicted RBP4.2□□□□□ -1.74
XRCC4-203ENST00000396027 CYP26A1O43174 497 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 F13BP05160 661 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 CCDC175P0C221 793 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 RLBP1P12271 317 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 PSMD7P51665 324 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 EIF5P55010 431 aaKnown RBP4.2□□□□□ -1.74
XRCC4-203ENST00000396027 NAP1L1P55209 391 aaKnown RBP4.2□□□□□ -1.74
XRCC4-203ENST00000396027 PLCL1Q15111 1095 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 ANKRD34AQ69YU3 496 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 SEPT14Q6ZU15 432 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 DHX32Q7L7V1 743 aaKnown RBP4.2□□□□□ -1.74
XRCC4-203ENST00000396027 CCDC186Q7Z3E2 898 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 BTLAQ7Z6A9 289 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 SPATS2Q86XZ4 545 aaKnown RBP4.2□□□□□ -1.74
XRCC4-203ENST00000396027 HSCBQ8IWL3 235 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 RBM12BQ8IXT5 1001 aaKnown RBP4.2□□□□□ -1.74
XRCC4-203ENST00000396027 OGFOD1Q8N543 542 aa4.2□□□□□ -1.74
XRCC4-203ENST00000396027 DRAXINQ8NBI3 349 aaPredicted RBP4.2□□□□□ -1.74
XRCC4-203ENST00000396027 FBXO18Q8NFZ0 1043 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms