RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GEMIN8Q9NWZ8 242 aaKnown RBP6.48□□□□□ -1.37
RFFL-202ENST00000394597 TFIP11Q9UBB9 837 aaKnown RBP6.48□□□□□ -1.37
RFFL-202ENST00000394597 CEP131Q9UPN4 1083 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 CAMTA1Q9Y6Y1 1673 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 E7EWF7 191 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 CAMTA2O94983 1202 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 CSF1RP07333 972 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 TXLNAP40222 546 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 GNG11P61952 73 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 RTN1Q16799 776 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 NBPF11Q86T75 865 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 TBC1D22AQ8WUA7 517 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 DNAJC25Q9H1X3 360 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 SEC63Q9UGP8 760 aaKnown RBP6.48□□□□□ -1.37
RFFL-202ENST00000394597 HDAC9Q9UKV0 1011 aa6.48□□□□□ -1.37
RFFL-202ENST00000394597 SEMA3EO15041 775 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 PPFIA3O75145 1194 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 NEBLO76041 1014 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CCDC172P0C7W6 258 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 GBP2P32456 591 aaPredicted RBP6.47□□□□□ -1.37
RFFL-202ENST00000394597 EVCP57679 992 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 FBXO38Q6PIJ6 1188 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 OLFM4Q6UX06 510 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CEP57Q86XR8 500 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 ANO10Q9NW15 660 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CEP83Q9Y592 693 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 TOPAZ1Q8N9V7 1692 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 PEAK1Q9H792 1746 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 B4E1Z4 1266 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 IPO7O95373 1038 aaKnown RBP6.47□□□□□ -1.37
RFFL-202ENST00000394597 F13A1P00488 732 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CFAP100Q494V2 611 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 DNAJC21Q5F1R6 531 aaKnown RBP6.47□□□□□ -1.37
RFFL-202ENST00000394597 MSL1Q68DK7 614 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 TMC4Q7Z404 712 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 OGFOD1Q8N543 542 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 LINC00116Q8NCU8 138 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 ANKRD7Q92527 254 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 NWD1Q149M9 1564 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CAVIN2O95810 425 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 FGAP02671 866 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CALM1P0DP23 149 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CALM2P0DP24 149 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 CALM3P0DP25 149 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 SYT1P21579 422 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 INTS5Q6P9B9 1019 aaKnown RBP6.47□□□□□ -1.37
RFFL-202ENST00000394597 ATG9AQ7Z3C6 839 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 TEX11Q8IYF3 940 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 RASEFQ8IZ41 740 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 LLPHQ9BRT6 129 aaKnown RBP6.47□□□□□ -1.37
RFFL-202ENST00000394597 ALG1Q9BT22 464 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 AATFQ9NY61 560 aaKnown RBP eCLIP6.47□□□□□ -1.37
RFFL-202ENST00000394597 DACT1Q9NYF0 836 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 STX8Q9UNK0 236 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 XDHP47989 1333 aa6.47□□□□□ -1.37
RFFL-202ENST00000394597 GNAQP50148 359 aa6.46□□□□□ -1.37
RFFL-202ENST00000394597 NLRP5P59047 1200 aa6.46□□□□□ -1.37
RFFL-202ENST00000394597 DNM1Q05193 864 aaKnown RBP6.46□□□□□ -1.37
RFFL-202ENST00000394597 PICALMQ13492 652 aa6.46□□□□□ -1.37
RFFL-202ENST00000394597 KIF4BQ2VIQ3 1234 aa6.46□□□□□ -1.37
RFFL-202ENST00000394597 IFNL3Q8IZI9 196 aa6.46□□□□□ -1.37
RFFL-202ENST00000394597 USP42Q9H9J4 1324 aaKnown RBP6.46□□□□□ -1.37
RFFL-202ENST00000394597 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.46□□□□□ -1.37
RFFL-202ENST00000394597 RIPOR2Q9Y4F9 1068 aa6.46□□□□□ -1.37
RFFL-202ENST00000394597 ERLIN2O94905 339 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 ADD2P35612 726 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 RFX5P48382 616 aaPredicted RBP6.46□□□□□ -1.38
RFFL-202ENST00000394597 GRAPQ13588 217 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 TXNRD1Q16881 649 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 TTC6Q86TZ1 520 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 ZNF589Q86UQ0 364 aaPredicted RBP6.46□□□□□ -1.38
RFFL-202ENST00000394597 C2CD5Q86YS7 1000 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 SUPT20HQ8NEM7 779 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 GRAPLQ8TC17 118 aaPredicted RBP6.46□□□□□ -1.38
RFFL-202ENST00000394597 CABP5Q9NP86 173 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 CPSF2Q9P2I0 782 aaKnown RBP6.46□□□□□ -1.38
RFFL-202ENST00000394597 ANGEL1Q9UNK9 670 aaKnown RBP6.46□□□□□ -1.38
RFFL-202ENST00000394597 RTL9Q8NET4 1388 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 A0A1B0GUA9 196 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 PTPDC1A2A3K4 754 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 POTEB2H3BUK9 544 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 TRIM66O15016 1216 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 CBFA2T2O43439 604 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 MYO1BO43795 1136 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 TUBB4AP04350 444 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 SLC20A2Q08357 652 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 FNBP4Q8N3X1 1017 aaPredicted RBP6.46□□□□□ -1.38
RFFL-202ENST00000394597 CCDC150Q8NCX0 1101 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 KAZALD1Q96I82 304 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 CARD6Q9BX69 1037 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 YY1AP1Q9H869 796 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 SPTLC3Q9NUV7 552 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 TCEAL9Q9UHQ7 104 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 BCL9O00512 1426 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 MAST3O60307 1309 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 CNTNAP4Q9C0A0 1308 aa6.46□□□□□ -1.38
RFFL-202ENST00000394597 EZRP15311 586 aaKnown RBP6.45□□□□□ -1.38
RFFL-202ENST00000394597 ZNF75DP51815 510 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 CTDSPL2Q05D32 466 aa6.45□□□□□ -1.38
RFFL-202ENST00000394597 NAA25Q14CX7 972 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms