RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 GSTO1P78417 241 aa19.54■□□□□ 0.72
PDGFA-201ENST00000354513 HABP4Q5JVS0 413 aaKnown RBP19.54■□□□□ 0.72
PDGFA-201ENST00000354513 GORABQ5T7V8 394 aa19.54■□□□□ 0.72
PDGFA-201ENST00000354513 SNRKQ9NRH2 765 aa19.54■□□□□ 0.72
PDGFA-201ENST00000354513 MAP4K4O95819 1239 aaPredicted RBP19.53■□□□□ 0.72
PDGFA-201ENST00000354513 LDHCP07864 332 aa19.53■□□□□ 0.72
PDGFA-201ENST00000354513 ATP8B2P98198 1209 aa19.53■□□□□ 0.72
PDGFA-201ENST00000354513 UBE2Q1Q7Z7E8 422 aa19.53■□□□□ 0.72
PDGFA-201ENST00000354513 MIER1Q8N108 512 aa19.53■□□□□ 0.72
PDGFA-201ENST00000354513 GCC1Q96CN9 775 aa19.53■□□□□ 0.72
PDGFA-201ENST00000354513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDGFA-201ENST00000354513 PCDH10Q9P2E7 1040 aa19.53■□□□□ 0.72
PDGFA-201ENST00000354513 AGTPBP1Q9UPW5 1226 aa19.53■□□□□ 0.72
PDGFA-201ENST00000354513 CYP2E1P05181 493 aaPredicted RBP19.52■□□□□ 0.72
PDGFA-201ENST00000354513 FCGRTP55899 365 aa19.52■□□□□ 0.72
PDGFA-201ENST00000354513 JAG1P78504 1218 aa19.52■□□□□ 0.72
PDGFA-201ENST00000354513 TEX11Q8IYF3 940 aa19.52■□□□□ 0.72
PDGFA-201ENST00000354513 RAET1EQ8TD07 263 aa19.52■□□□□ 0.72
PDGFA-201ENST00000354513 DNAJC18Q9H819 358 aa19.52■□□□□ 0.72
PDGFA-201ENST00000354513 TLR7Q9NYK1 1049 aaKnown RBP19.52■□□□□ 0.72
PDGFA-201ENST00000354513 CCL5P13501 91 aa19.51■□□□□ 0.71
PDGFA-201ENST00000354513 HOXD10P28358 340 aa19.51■□□□□ 0.71
PDGFA-201ENST00000354513 SHROOM1Q2M3G4 852 aaPredicted RBP19.51■□□□□ 0.71
PDGFA-201ENST00000354513 AATFQ9NY61 560 aaKnown RBP eCLIP19.51■□□□□ 0.71
PDGFA-201ENST00000354513 DBNLQ9UJU6 430 aaKnown RBP19.51■□□□□ 0.71
PDGFA-201ENST00000354513 CAP2P40123 477 aa19.51■□□□□ 0.71
PDGFA-201ENST00000354513 PIH1D3Q9NQM4 214 aaKnown RBP19.51■□□□□ 0.71
PDGFA-201ENST00000354513 LRP2BPQ9P2M1 347 aa19.51■□□□□ 0.71
PDGFA-201ENST00000354513 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
PDGFA-201ENST00000354513 FRMPD3Q5JV73 1810 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 FLT1P17948 1338 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
PDGFA-201ENST00000354513 ZAP70P43403 619 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 GJA8P48165 433 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 FLT3LGP49771 235 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 PPP4CP60510 307 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 SPP2Q13103 211 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 TTC39AQ5SRH9 613 aa19.5■□□□□ 0.71
PDGFA-201ENST00000354513 NAA16Q6N069 864 aaPredicted RBP19.5■□□□□ 0.71
PDGFA-201ENST00000354513 PROCA1Q8NCQ7 364 aaPredicted RBP19.5■□□□□ 0.71
PDGFA-201ENST00000354513 ZNF512BQ96KM6 892 aaPredicted RBP19.5■□□□□ 0.71
PDGFA-201ENST00000354513 SURF6O75683 361 aaKnown RBP19.49■□□□□ 0.71
PDGFA-201ENST00000354513 GJB1P08034 283 aa19.49■□□□□ 0.71
PDGFA-201ENST00000354513 ELNP15502 786 aa19.49■□□□□ 0.71
PDGFA-201ENST00000354513 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDGFA-201ENST00000354513 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
PDGFA-201ENST00000354513 ANKRD13CQ8N6S4 541 aa19.49■□□□□ 0.71
PDGFA-201ENST00000354513 ZNF280CQ8ND82 737 aa19.49■□□□□ 0.71
PDGFA-201ENST00000354513 SLAIN1Q8ND83 568 aa19.49■□□□□ 0.71
PDGFA-201ENST00000354513 UNC93B1Q9H1C4 597 aa19.49■□□□□ 0.71
PDGFA-201ENST00000354513 ADCY3O60266 1144 aa19.48■□□□□ 0.71
PDGFA-201ENST00000354513 HMGCS2P54868 508 aa19.48■□□□□ 0.71
PDGFA-201ENST00000354513 SH3D19Q5HYK7 790 aa19.48■□□□□ 0.71
PDGFA-201ENST00000354513 MAPKAPK5Q8IW41 473 aa19.48■□□□□ 0.71
PDGFA-201ENST00000354513 SMCR8Q8TEV9 937 aaPredicted RBP19.48■□□□□ 0.71
PDGFA-201ENST00000354513 EAF2Q96CJ1 260 aaPredicted RBP19.48■□□□□ 0.71
PDGFA-201ENST00000354513 HERC5Q9UII4 1024 aaKnown RBP19.48■□□□□ 0.71
PDGFA-201ENST00000354513 COLQQ9Y215 455 aaPredicted RBP19.48■□□□□ 0.71
PDGFA-201ENST00000354513 CEP290O15078 2479 aa19.47■□□□□ 0.71
PDGFA-201ENST00000354513 MYH8P13535 1937 aa19.47■□□□□ 0.71
PDGFA-201ENST00000354513 H0YGN5 161 aa19.47■□□□□ 0.71
PDGFA-201ENST00000354513 FXR1P51114 621 aaKnown RBP eCLIP19.47■□□□□ 0.71
PDGFA-201ENST00000354513 DYNLL1P63167 89 aaKnown RBP19.47■□□□□ 0.71
PDGFA-201ENST00000354513 IRF5Q13568 498 aa19.47■□□□□ 0.71
PDGFA-201ENST00000354513 FAM110CQ1W6H9 321 aa19.47■□□□□ 0.71
PDGFA-201ENST00000354513 TGFBRAP1Q8WUH2 860 aa19.47■□□□□ 0.71
PDGFA-201ENST00000354513 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
PDGFA-201ENST00000354513 MYH7P12883 1935 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 USP17L5A8MUK1 530 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 TNPO2O14787 897 aaKnown RBP19.46■□□□□ 0.71
PDGFA-201ENST00000354513 INHAP05111 366 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 OS9Q13438 667 aaPredicted RBP19.46■□□□□ 0.71
PDGFA-201ENST00000354513 CCDC158Q5M9N0 1113 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 CEP85Q6P2H3 762 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 ITPRIPQ8IWB1 547 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 RNF208Q9H0X6 261 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 PI4KBQ9UBF8 816 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
PDGFA-201ENST00000354513 UBXN2AP68543 259 aa19.45■□□□□ 0.7
PDGFA-201ENST00000354513 PXYLP1Q8TE99 480 aa19.45■□□□□ 0.7
PDGFA-201ENST00000354513 U2AF1L4Q8WU68 220 aaKnown RBP19.45■□□□□ 0.7
PDGFA-201ENST00000354513 WDR18Q9BV38 432 aa19.45■□□□□ 0.7
PDGFA-201ENST00000354513 ASCC2Q9H1I8 757 aaPredicted RBP19.45■□□□□ 0.7
PDGFA-201ENST00000354513 PNMA3Q9UL41 463 aa19.45■□□□□ 0.7
PDGFA-201ENST00000354513 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
PDGFA-201ENST00000354513 PEX10O60683 326 aa19.44■□□□□ 0.7
PDGFA-201ENST00000354513 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
PDGFA-201ENST00000354513 NKX2-3Q8TAU0 364 aa19.44■□□□□ 0.7
PDGFA-201ENST00000354513 DHX36Q9H2U1 1008 aaKnown RBP19.44■□□□□ 0.7
PDGFA-201ENST00000354513 BIN2Q9UBW5 565 aaPredicted RBP19.44■□□□□ 0.7
PDGFA-201ENST00000354513 PARP14Q460N5 1801 aa19.44■□□□□ 0.7
PDGFA-201ENST00000354513 BAG3O95817 575 aa19.43■□□□□ 0.7
PDGFA-201ENST00000354513 PLCG2P16885 1265 aa19.43■□□□□ 0.7
PDGFA-201ENST00000354513 MTMR2Q13614 643 aa19.43■□□□□ 0.7
PDGFA-201ENST00000354513 NOL10Q9BSC4 688 aaKnown RBP19.43■□□□□ 0.7
PDGFA-201ENST00000354513 ANTXR1Q9H6X2 564 aa19.43■□□□□ 0.7
PDGFA-201ENST00000354513 PAK6Q9NQU5 681 aaPredicted RBP19.43■□□□□ 0.7
PDGFA-201ENST00000354513 SAP30BPQ9UHR5 308 aaKnown RBP19.43■□□□□ 0.7
PDGFA-201ENST00000354513 RLFQ13129 1914 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms