RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 KRT32Q14532 448 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 DHX8Q14562 1220 aaKnown RBP8.75□□□□□ -1.01
C11orf54-202ENST00000354421 XP32Q5T750 250 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 ATL3Q6DD88 541 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
C11orf54-202ENST00000354421 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 HPS1Q92902 700 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 FAM227BQ96M60 508 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 OSBPL5Q9H0X9 879 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-202ENST00000354421 IMPACTQ9P2X3 320 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 RCOR1Q9UKL0 485 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 CFAP45Q9UL16 551 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 TRIOBPQ9H2D6 2365 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 PIK3C2AO00443 1686 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 PKD1L2Q7Z442 2459 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 THSD7BQ9C0I4 1608 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 A0A0U1RQG5 324 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 CCDC69A6NI79 296 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 RC3H1Q5TC82 1133 aaKnown RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 C11orf57Q6ZUT1 292 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 AACSQ86V21 672 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 GTF3C6Q969F1 213 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 L2HGDHQ9H9P8 463 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 ANO10Q9NW15 660 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 MRC1P22897 1456 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 A0A0D9SFI3 127 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 PI4KAP2A4QPH2 592 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 H2AFXP16104 143 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 HOXC9P31274 260 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 ADD1P35611 737 aaKnown RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 FGD1P98174 961 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 BMS1Q14692 1282 aaKnown RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 ARID5BQ14865 1188 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 NAA16Q6N069 864 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 FBXO38Q6PIJ6 1188 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 DHX40Q8IX18 779 aaKnown RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 NPAS3Q8IXF0 933 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 PI4KAP1Q8N8J0 262 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 SMARCC2Q8TAQ2 1214 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 ZNF592Q92610 1267 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 BRF1Q92994 677 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 GPR101Q96P66 508 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 LLPHQ9BRT6 129 aaKnown RBP8.74□□□□□ -1.01
C11orf54-202ENST00000354421 TMEM51Q9NW97 253 aa8.74□□□□□ -1.01
C11orf54-202ENST00000354421 UTYO14607 1347 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 SYNGAP1Q96PV0 1343 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 MYH15Q9Y2K3 1946 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 RFX7Q2KHR2 1363 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 CD46P15529 392 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 COL9A3Q14050 684 aaPredicted RBP8.73□□□□□ -1.01
C11orf54-202ENST00000354421 ELF2Q15723 593 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 CCDC93Q567U6 631 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 ENGASEQ8NFI3 743 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 CALCOCO1Q9P1Z2 691 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 CHPF2Q9P2E5 772 aa8.73□□□□□ -1.01
C11orf54-202ENST00000354421 NCAPD2Q15021 1401 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 TAF5LO75529 589 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 SASH1O94885 1247 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 ECE1P42892 770 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 SNW1Q13573 536 aaKnown RBP8.72□□□□□ -1.01
C11orf54-202ENST00000354421 NUTM2GQ5VZR2 741 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 CCAR1Q8IX12 1150 aaKnown RBP8.72□□□□□ -1.01
C11orf54-202ENST00000354421 CEP57L1Q8IYX8 460 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 CCDC150Q8NCX0 1101 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 ZNF446Q9NWS9 450 aa8.72□□□□□ -1.01
C11orf54-202ENST00000354421 BECN2A8MW95 431 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 H3BQV1 296 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 JAK2O60674 1132 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 PFKFB2O60825 505 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 EIF2S2P20042 333 aaKnown RBP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 TGFB2P61812 414 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 FAM160A1Q05DH4 1040 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 G3BP1Q13283 466 aaKnown RBP eCLIP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 CCDC73Q6ZRK6 1079 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 EAF2Q96CJ1 260 aaPredicted RBP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 CAPNS2Q96L46 248 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 TIGD1Q96MW7 591 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 ZNF396Q96N95 335 aaPredicted RBP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 NEK1Q96PY6 1258 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 BPIFA3Q9BQP9 254 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 FSD1Q9BTV5 496 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 GOLPH3LQ9H4A5 285 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 NXF1Q9UBU9 619 aaKnown RBP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 PA2G4Q9UQ80 394 aaKnown RBP8.71□□□□□ -1.01
C11orf54-202ENST00000354421 TAF6LQ9Y6J9 622 aa8.71□□□□□ -1.01
C11orf54-202ENST00000354421 LMO7Q8WWI1 1683 aa8.71□□□□□ -1.02
C11orf54-202ENST00000354421 ABCC6O95255 1503 aa8.71□□□□□ -1.02
C11orf54-202ENST00000354421 CYP2C19P33261 490 aa8.71□□□□□ -1.02
C11orf54-202ENST00000354421 MAP2K2P36507 400 aa8.71□□□□□ -1.02
C11orf54-202ENST00000354421 ZC3H6P61129 1189 aaKnown RBP8.71□□□□□ -1.02
C11orf54-202ENST00000354421 SLC20A2Q08357 652 aa8.71□□□□□ -1.02
C11orf54-202ENST00000354421 STK3Q13188 491 aa8.71□□□□□ -1.02
C11orf54-202ENST00000354421 E4F1Q66K89 784 aaPredicted RBP8.71□□□□□ -1.02
C11orf54-202ENST00000354421 KSR2Q6VAB6 950 aa8.71□□□□□ -1.02
C11orf54-202ENST00000354421 NBPF11Q86T75 865 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms