RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 MCAMP43121 646 aa20.52■□□□□ 0.88
CTSB-202ENST00000353047 UBXN1Q04323 297 aa20.52■□□□□ 0.88
CTSB-202ENST00000353047 CSRNP2Q9H175 543 aa20.52■□□□□ 0.88
CTSB-202ENST00000353047 A0A0U1RQJ8 604 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 ZPR1O75312 459 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 ANTXR2P58335 489 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 RNASE9P60153 205 aaKnown RBP20.52■□□□□ 0.87
CTSB-202ENST00000353047 SAMD1Q6SPF0 538 aaPredicted RBP20.52■□□□□ 0.87
CTSB-202ENST00000353047 NOSTRINQ8IVI9 506 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 ATRIPQ8WXE1 791 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 WASF1Q92558 559 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 ZHX3Q9H4I2 956 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 PIH1D3Q9NQM4 214 aaKnown RBP20.52■□□□□ 0.87
CTSB-202ENST00000353047 MAN1B1Q9UKM7 699 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 TFR2Q9UP52 801 aa20.52■□□□□ 0.87
CTSB-202ENST00000353047 PDE6AP16499 860 aa20.51■□□□□ 0.87
CTSB-202ENST00000353047 RBL2Q08999 1139 aa20.51■□□□□ 0.87
CTSB-202ENST00000353047 TTC19Q6DKK2 380 aaPredicted RBP20.51■□□□□ 0.87
CTSB-202ENST00000353047 STARD3NLO95772 234 aa20.51■□□□□ 0.87
CTSB-202ENST00000353047 SF3A3Q12874 501 aaKnown RBP eCLIP20.51■□□□□ 0.872e-6■■■■■ 32.1
CTSB-202ENST00000353047 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
CTSB-202ENST00000353047 RUFY1Q96T51 708 aa20.51■□□□□ 0.87
CTSB-202ENST00000353047 PLEKHG1Q9ULL1 1385 aa20.51■□□□□ 0.87
CTSB-202ENST00000353047 RBM43Q6ZSC3 357 aaKnown RBP20.51■□□□□ 0.87
CTSB-202ENST00000353047 CRACR2AQ9BSW2 395 aa20.51■□□□□ 0.87
CTSB-202ENST00000353047 OSBPL5Q9H0X9 879 aaPredicted RBP20.51■□□□□ 0.87
CTSB-202ENST00000353047 KRT9P35527 623 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 VSTM4Q8IW00 320 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 SLC35F6Q8N357 371 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 SH3TC1Q8TE82 1336 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 CEMIPQ8WUJ3 1361 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 LONRF2Q1L5Z9 754 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 PIK3AP1Q6ZUJ8 805 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.5■□□□□ 0.87
CTSB-202ENST00000353047 POLD4Q9HCU8 107 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 PREX1Q8TCU6 1659 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 PATL2C9JE40 543 aaKnown RBP20.5■□□□□ 0.87
CTSB-202ENST00000353047 CUTAO60888 179 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 IRX5P78411 483 aaPredicted RBP20.5■□□□□ 0.87
CTSB-202ENST00000353047 FOXO4P98177 505 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 TSGA10IPQ3SY00 556 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
CTSB-202ENST00000353047 BCAMP50895 628 aa20.49■□□□□ 0.87
CTSB-202ENST00000353047 TRIM66O15016 1216 aa20.49■□□□□ 0.87
CTSB-202ENST00000353047 NOM1Q5C9Z4 860 aaKnown RBP20.49■□□□□ 0.87
CTSB-202ENST00000353047 NCAPH2Q6IBW4 605 aa20.49■□□□□ 0.87
CTSB-202ENST00000353047 TRIM47Q96LD4 638 aa20.49■□□□□ 0.87
CTSB-202ENST00000353047 TRIM21P19474 475 aaKnown RBP20.49■□□□□ 0.87
CTSB-202ENST00000353047 TXLNBQ8N3L3 684 aa20.49■□□□□ 0.87
CTSB-202ENST00000353047 NEDD4P46934 1319 aa20.49■□□□□ 0.87
CTSB-202ENST00000353047 EFCAB8A8MWE9 144 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 PTPROQ16827 1216 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 CEP131Q9UPN4 1083 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 SYNRGQ9UMZ2 1314 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 PLA2G4AP47712 749 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 FAM47AQ5JRC9 791 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 HPS5Q9UPZ3 1129 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 H0YHG0 523 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 TXLNAP40222 546 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
CTSB-202ENST00000353047 SMARCC1Q92922 1105 aaPredicted RBP20.48■□□□□ 0.87
CTSB-202ENST00000353047 ZNHIT6Q9NWK9 470 aaKnown RBP20.48■□□□□ 0.87
CTSB-202ENST00000353047 FAN1Q9Y2M0 1017 aa20.48■□□□□ 0.87
CTSB-202ENST00000353047 CLTCQ00610 1675 aaKnown RBP20.47■□□□□ 0.87
CTSB-202ENST00000353047 FOXP4Q8IVH2 680 aaPredicted RBP20.47■□□□□ 0.87
CTSB-202ENST00000353047 MRPL44Q9H9J2 332 aaKnown RBP20.47■□□□□ 0.87
CTSB-202ENST00000353047 SLC5A1P13866 664 aa20.47■□□□□ 0.87
CTSB-202ENST00000353047 ARID5AQ03989 594 aa20.47■□□□□ 0.87
CTSB-202ENST00000353047 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
CTSB-202ENST00000353047 CTR9Q6PD62 1173 aa20.47■□□□□ 0.87
CTSB-202ENST00000353047 MB21D2Q8IYB1 491 aaPredicted RBP20.47■□□□□ 0.87
CTSB-202ENST00000353047 GSPT2Q8IYD1 628 aaKnown RBP20.47■□□□□ 0.87
CTSB-202ENST00000353047 IFNL3Q8IZI9 196 aa20.47■□□□□ 0.87
CTSB-202ENST00000353047 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
CTSB-202ENST00000353047 ACBD3Q9H3P7 528 aa20.47■□□□□ 0.87
CTSB-202ENST00000353047 PXDNQ92626 1479 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 CCDC196A0A1B0GTZ2 297 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 SRGAP2O75044 1071 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 IDEP14735 1019 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 CCDC181Q5TID7 509 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 CATIPQ7Z7H3 387 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 ZMYM6O95789 1325 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 NCAPHQ15003 741 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 HLFQ16534 295 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
CTSB-202ENST00000353047 FHOD1Q9Y613 1164 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 ATP2B2Q01814 1243 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 CCDC70Q6NSX1 233 aa20.46■□□□□ 0.87
CTSB-202ENST00000353047 GOLGA6L9A6NEM1 432 aa20.45■□□□□ 0.86
CTSB-202ENST00000353047 N4BP1O75113 896 aaKnown RBP20.45■□□□□ 0.86
CTSB-202ENST00000353047 MTIF2P46199 727 aaKnown RBP20.45■□□□□ 0.86
CTSB-202ENST00000353047 CCDC122Q5T0U0 273 aa20.45■□□□□ 0.86
CTSB-202ENST00000353047 CC2D1AQ6P1N0 951 aaPredicted RBP20.45■□□□□ 0.86
CTSB-202ENST00000353047 SEC31BQ9NQW1 1179 aa20.45■□□□□ 0.86
CTSB-202ENST00000353047 STX8Q9UNK0 236 aa20.45■□□□□ 0.86
CTSB-202ENST00000353047 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
CTSB-202ENST00000353047 SYCP1Q15431 976 aa20.45■□□□□ 0.86
CTSB-202ENST00000353047 IQCA1Q86XH1 822 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms