RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MGAMO43451 1857 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 TNPO2O14787 897 aaKnown RBP9.98□□□□□ -0.81
CD44-205ENST00000352818 MYO1BO43795 1136 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
CD44-205ENST00000352818 HMGCRP04035 888 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 NHLH1Q02575 133 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 PPATQ06203 517 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 TRIM28Q13263 835 aaKnown RBP9.98□□□□□ -0.81
CD44-205ENST00000352818 AKNAD1Q5T1N1 836 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 LHX8Q68G74 356 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 ANKRD18AQ8IVF6 992 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 JARID2Q92833 1246 aaPredicted RBP9.98□□□□□ -0.81
CD44-205ENST00000352818 PARK7Q99497 189 aaKnown RBP9.98□□□□□ -0.81
CD44-205ENST00000352818 TDRD3Q9H7E2 651 aaKnown RBP9.98□□□□□ -0.81
CD44-205ENST00000352818 CD209Q9NNX6 404 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 HMX1Q9NP08 348 aaPredicted RBP9.98□□□□□ -0.81
CD44-205ENST00000352818 GJD2Q9UKL4 321 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 EXOC6BQ9Y2D4 811 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 LTBP2Q14767 1821 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 ECM29Q5VYK3 1845 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 C5orf42Q9H799 3197 aa9.98□□□□□ -0.81
CD44-205ENST00000352818 TCP10L2B9ZVM9 353 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 SNAP23O00161 211 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 GRM8O00222 908 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 NBPF7P0C2Y1 421 aaPredicted RBP9.97□□□□□ -0.81
CD44-205ENST00000352818 MX1P20591 662 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 INPP5BP32019 993 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 EPHB4P54760 987 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 TFF2Q03403 129 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 NEXNQ0ZGT2 675 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 CASC1Q6TDU7 716 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
CD44-205ENST00000352818 SNX21Q969T3 373 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 METTL22Q9BUU2 404 aaPredicted RBP9.97□□□□□ -0.81
CD44-205ENST00000352818 AK9Q5TCS8 1911 aa9.97□□□□□ -0.81
CD44-205ENST00000352818 DOCK3Q8IZD9 2030 aa9.96□□□□□ -0.81
CD44-205ENST00000352818 SRGAP3O43295 1099 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 SDSP20132 328 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 KCNQ1P51787 676 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 CCDC85BQ15834 202 aaPredicted RBP9.96□□□□□ -0.82
CD44-205ENST00000352818 ERC1Q8IUD2 1116 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 PLBD2Q8NHP8 589 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 TRIB2Q92519 343 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 ZNF576Q9H609 170 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 BSDC1Q9NW68 430 aaPredicted RBP9.96□□□□□ -0.82
CD44-205ENST00000352818 C9orf78Q9NZ63 289 aaPredicted RBP9.96□□□□□ -0.82
CD44-205ENST00000352818 JAG2Q9Y219 1238 aa9.96□□□□□ -0.82
CD44-205ENST00000352818 TCF20Q9UGU0 1960 aaKnown RBP9.95□□□□□ -0.82
CD44-205ENST00000352818 NEURL1BA8MQ27 555 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 EPB41L2O43491 1005 aaKnown RBP9.95□□□□□ -0.82
CD44-205ENST00000352818 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 DNAJB2P25686 324 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 TNFAIP1Q13829 316 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 RIC3Q7Z5B4 369 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 RHPN1Q8TCX5 695 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 BADQ92934 168 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 CXXC1Q9P0U4 656 aaPredicted RBP9.95□□□□□ -0.82
CD44-205ENST00000352818 LEMD3Q9Y2U8 911 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
CD44-205ENST00000352818 MAST2Q6P0Q8 1798 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 ARAP2Q8WZ64 1704 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 TTC41PQ6P2S7 1318 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 SMIM22K7EJ46 135 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 SURF6O75683 361 aaKnown RBP9.94□□□□□ -0.82
CD44-205ENST00000352818 CACNB3P54284 484 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 GCKRQ14397 625 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 CWF19L2Q2TBE0 894 aaKnown RBP9.94□□□□□ -0.82
CD44-205ENST00000352818 SUCLG2Q96I99 432 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
CD44-205ENST00000352818 APBB1O00213 710 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 PDE8AO60658 829 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 REC8O95072 547 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 PRKAR2AP13861 404 aaKnown RBP9.93□□□□□ -0.82
CD44-205ENST00000352818 ITGB8P26012 769 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 SLC4A3P48751 1232 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 RBM5P52756 815 aaKnown RBP eCLIP9.93□□□□□ -0.82
CD44-205ENST00000352818 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
CD44-205ENST00000352818 FKBP1AP62942 108 aaKnown RBP9.93□□□□□ -0.82
CD44-205ENST00000352818 HSCBQ8IWL3 235 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 KAZALD1Q96I82 304 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 KIF2CQ99661 725 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 PRDM12Q9H4Q4 367 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 ANTXR1Q9H6X2 564 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 GREM2Q9H772 168 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 DAGLAQ9Y4D2 1042 aa9.93□□□□□ -0.82
CD44-205ENST00000352818 TRIM43BA6NCK2 446 aa9.92□□□□□ -0.82
CD44-205ENST00000352818 ERC2O15083 957 aa9.92□□□□□ -0.82
CD44-205ENST00000352818 CCND3P30281 292 aaPredicted RBP9.92□□□□□ -0.82
CD44-205ENST00000352818 RTP1P59025 263 aa9.92□□□□□ -0.82
CD44-205ENST00000352818 GRIK5Q16478 980 aa9.92□□□□□ -0.82
CD44-205ENST00000352818 RABL6Q3YEC7 729 aaPredicted RBP9.92□□□□□ -0.82
CD44-205ENST00000352818 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
CD44-205ENST00000352818 TRIM43Q96BQ3 446 aaPredicted RBP9.92□□□□□ -0.82
CD44-205ENST00000352818 COA7Q96BR5 231 aa9.92□□□□□ -0.82
CD44-205ENST00000352818 IL17RAQ96F46 866 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms