RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MMRN2Q9H8L6 949 aa18.02■□□□□ 0.48
NPHP3-201ENST00000337331 TPCN1Q9ULQ1 816 aa18.02■□□□□ 0.48
NPHP3-201ENST00000337331 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.47
NPHP3-201ENST00000337331 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.47
NPHP3-201ENST00000337331 CETN1Q12798 172 aa18.02■□□□□ 0.47
NPHP3-201ENST00000337331 FOXR1Q6PIV2 292 aa18.02■□□□□ 0.47
NPHP3-201ENST00000337331 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.47
NPHP3-201ENST00000337331 CTNNBL1Q8WYA6 563 aaPredicted RBP18.02■□□□□ 0.47
NPHP3-201ENST00000337331 ZNF594Q96JF6 807 aaPredicted RBP18.02■□□□□ 0.47
NPHP3-201ENST00000337331 AKR1B15C9JRZ8 316 aaPredicted RBP18.01■□□□□ 0.47
NPHP3-201ENST00000337331 PAF1Q8N7H5 531 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 CALR3Q96L12 384 aaKnown RBP18.01■□□□□ 0.47
NPHP3-201ENST00000337331 IRAK4Q9NWZ3 460 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 TRPM2O94759 1503 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 C19orf44Q9H6X5 657 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 CFAP65Q6ZU64 1925 aaKnown RBP18.01■□□□□ 0.47
NPHP3-201ENST00000337331 MBD4O95243 580 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 MAP2K1Q02750 393 aaPredicted RBP18.01■□□□□ 0.47
NPHP3-201ENST00000337331 DPCR1Q3MIW9 517 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 KIAA1468Q9P260 1216 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 RIPOR2Q9Y4F9 1068 aa18.01■□□□□ 0.47
NPHP3-201ENST00000337331 GNAT2P19087 354 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 NAPAP54920 295 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 WDR3Q9UNX4 943 aaKnown RBP eCLIP18■□□□□ 0.47
NPHP3-201ENST00000337331 CALML3P27482 149 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 HNRNPH1P31943 449 aaKnown RBP18■□□□□ 0.47
NPHP3-201ENST00000337331 ADCK5Q3MIX3 580 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 ANO1Q5XXA6 986 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 SARM1Q6SZW1 724 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 CDC23Q9UJX2 597 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 IFT88Q13099 833 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 SSH3Q8TE77 659 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 CABP5Q9NP86 173 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 MCM9Q9NXL9 1143 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 N4BP1O75113 896 aaKnown RBP18■□□□□ 0.47
NPHP3-201ENST00000337331 SCP2P22307 547 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 GCKRQ14397 625 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 IQUBQ8NA54 791 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 LLPHQ9BRT6 129 aaKnown RBP18■□□□□ 0.47
NPHP3-201ENST00000337331 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
NPHP3-201ENST00000337331 LRRC27Q9C0I9 530 aa18■□□□□ 0.47
NPHP3-201ENST00000337331 KIAA0232Q92628 1395 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 MBD5Q9P267 1494 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 CLASP1Q7Z460 1538 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 EIF4A1P60842 406 aaKnown RBP17.99■□□□□ 0.47
NPHP3-201ENST00000337331 SNCBQ16143 134 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 PRPF38AQ8NAV1 312 aaKnown RBP17.99■□□□□ 0.47
NPHP3-201ENST00000337331 ELF1P32519 619 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 MCM7P33993 719 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 RFC4P35249 363 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 ZRSR2Q15696 482 aaKnown RBP17.99■□□□□ 0.47
NPHP3-201ENST00000337331 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 TACO1Q9BSH4 297 aaKnown RBP17.99■□□□□ 0.47
NPHP3-201ENST00000337331 HLA-DOAP06340 250 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 KIF5AQ12840 1032 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 PPFIA1Q13136 1202 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 CCDC42Q96M95 316 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 USP28Q96RU2 1077 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 SETDB2Q96T68 719 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 PSD3Q9NYI0 1048 aa17.99■□□□□ 0.47
NPHP3-201ENST00000337331 A1BGP04217 495 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 IFT81Q8WYA0 676 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 APPBP2Q92624 585 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 TM6SF1Q9BZW5 370 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 FTOQ9C0B1 505 aaKnown RBP eCLIP17.98■□□□□ 0.47
NPHP3-201ENST00000337331 ANGEL1Q9UNK9 670 aaKnown RBP17.98■□□□□ 0.47
NPHP3-201ENST00000337331 GPAA1O43292 621 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 CALM1P0DP23 149 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 CALM2P0DP24 149 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 CALM3P0DP25 149 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 KRT2P35908 639 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 CCDC50Q8IVM0 306 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 IL17REQ8NFR9 667 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
NPHP3-201ENST00000337331 ORAI2Q96SN7 254 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 PLIN2Q99541 437 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 E7EVH7 732 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 KRT86O43790 486 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 ZNF202O95125 648 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 NLRP12P59046 1061 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 SYCP3Q8IZU3 236 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 PPANQ9NQ55 473 aaKnown RBP17.98■□□□□ 0.47
NPHP3-201ENST00000337331 KCTD16Q68DU8 428 aa17.98■□□□□ 0.47
NPHP3-201ENST00000337331 VWA3AA6NCI4 1184 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 UBXN1Q04323 297 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 ZKSCAN8Q15776 578 aaPredicted RBP17.97■□□□□ 0.47
NPHP3-201ENST00000337331 GOLGA6L10A0A0M3HER8 536 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 TACC1O75410 805 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 ARID5AQ03989 594 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 RILPL1Q5EBL4 403 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 IGSF22Q8N9C0 903 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 L2HGDHQ9H9P8 463 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 SUGCTQ9HAC7 445 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 KCNH3Q9ULD8 1083 aa17.97■□□□□ 0.47
NPHP3-201ENST00000337331 F8W031 263 aaPredicted RBP17.97■□□□□ 0.47
NPHP3-201ENST00000337331 TBCAO75347 108 aaKnown RBP17.97■□□□□ 0.47
NPHP3-201ENST00000337331 GSTO1P78417 241 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms