RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 KRT25Q7Z3Z0 450 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 DZIP3Q86Y13 1208 aaKnown RBP14.05□□□□□ -0.16
FN1-201ENST00000323926 ARHGEF37A1IGU5 675 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 F6X3S4 739 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 CCDC114Q96M63 670 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 BAG1Q99933 345 aaPredicted RBP14.05□□□□□ -0.16
FN1-201ENST00000323926 MMRN2Q9H8L6 949 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 A0A1B0GUA9 196 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
FN1-201ENST00000323926 CALR3Q96L12 384 aaKnown RBP14.05□□□□□ -0.16
FN1-201ENST00000323926 KIAA0232Q92628 1395 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 BIN1O00499 593 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 BRF1Q92994 677 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 F8W8V4 182 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 PHBP35232 272 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 MYH15Q9Y2K3 1946 aa14.05□□□□□ -0.16
FN1-201ENST00000323926 ADAMTS2O95450 1211 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 MAN1A1P33908 653 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 GPHNQ9NQX3 736 aaPredicted RBP14.04□□□□□ -0.16
FN1-201ENST00000323926 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
FN1-201ENST00000323926 KIAA1210Q9ULL0 1709 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.16
FN1-201ENST00000323926 TSNAXIP1Q2TAA8 658 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 CREB3L3Q68CJ9 461 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 PDZD4Q76G19 769 aaPredicted RBP14.04□□□□□ -0.16
FN1-201ENST00000323926 CARD10Q9BWT7 1032 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 CETN3O15182 167 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 CPLX3Q8WVH0 158 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 ZC3H13Q5T200 1668 aaKnown RBP14.04□□□□□ -0.16
FN1-201ENST00000323926 SETSIPP0DME0 302 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 PLBD2Q8NHP8 589 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 HVCN1Q96D96 273 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 TRIM6Q9C030 488 aaPredicted RBP14.04□□□□□ -0.16
FN1-201ENST00000323926 VCX3AQ9NNX9 186 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 SYNRGQ9UMZ2 1314 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 DDX21Q9NR30 783 aaKnown RBP eCLIP14.04□□□□□ -0.16
FN1-201ENST00000323926 ATP7BP35670 1465 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 A0A1B0GVL5 298 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 PLS1Q14651 629 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 SLFN12Q8IYM2 578 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 IP6K1Q92551 441 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 FAM204AQ9H8W3 233 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 TPD52P55327 224 aaPredicted RBP14.04□□□□□ -0.16
FN1-201ENST00000323926 ERBB4Q15303 1308 aa14.04□□□□□ -0.16
FN1-201ENST00000323926 SIRT1Q96EB6 747 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 AFMP43652 599 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 CFAP221Q4G0U5 840 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 CNBD1Q8NA66 436 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 KMT5BQ4FZB7 885 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 NOP56O00567 594 aaKnown RBP14.03□□□□□ -0.16
FN1-201ENST00000323926 NR1I2O75469 434 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 CAPN2P17655 700 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 GRK7Q8WTQ7 553 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 NUF2Q9BZD4 464 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 LAD1O00515 517 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
FN1-201ENST00000323926 IPO11Q9UI26 975 aaKnown RBP14.03□□□□□ -0.16
FN1-201ENST00000323926 IVNS1ABPQ9Y6Y0 642 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 ZCCHC11Q5TAX3 1644 aaKnown RBP14.03□□□□□ -0.16
FN1-201ENST00000323926 APPBP2Q92624 585 aa14.03□□□□□ -0.16
FN1-201ENST00000323926 PAIP2Q9BPZ3 127 aaKnown RBP14.03□□□□□ -0.16
FN1-201ENST00000323926 BZW2Q9Y6E2 419 aaKnown RBP14.03□□□□□ -0.16
FN1-201ENST00000323926 COPS6Q7L5N1 327 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 ATRIPQ8WXE1 791 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 BACH1O14867 736 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 PPFIA2O75334 1257 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 APOBRQ0VD83 1088 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 MCM6Q14566 821 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 TMC4Q7Z404 712 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 MRPL50Q8N5N7 158 aaKnown RBP14.02□□□□□ -0.16
FN1-201ENST00000323926 NAPGQ99747 312 aaPredicted RBP14.02□□□□□ -0.16
FN1-201ENST00000323926 IFT122Q9HBG6 1241 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 DNAI1Q9UI46 699 aa14.02□□□□□ -0.16
FN1-201ENST00000323926 MICAL3Q7RTP6 2002 aa14.02□□□□□ -0.17
FN1-201ENST00000323926 SH3BP5O60239 455 aa14.02□□□□□ -0.17
FN1-201ENST00000323926 ERO1AQ96HE7 468 aa14.02□□□□□ -0.17
FN1-201ENST00000323926 TRAPPC3LQ5T215 181 aa14.02□□□□□ -0.17
FN1-201ENST00000323926 ZNF189O75820 626 aaPredicted RBP14.02□□□□□ -0.17
FN1-201ENST00000323926 CHMP4BP1P59074 171 aa14.02□□□□□ -0.17
FN1-201ENST00000323926 CSRNP1Q96S65 589 aa14.02□□□□□ -0.17
FN1-201ENST00000323926 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
FN1-201ENST00000323926 LMNTD2Q8IXW0 634 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 AOPEPQ8N6M6 819 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 DONSONQ9NYP3 566 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 TFIP11Q9UBB9 837 aaKnown RBP14.01□□□□□ -0.17
FN1-201ENST00000323926 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 MYL1P05976 194 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 HAND2P61296 217 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 LMNB2Q03252 620 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 DACT1Q9NYF0 836 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
FN1-201ENST00000323926 ARHGAP6O43182 974 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 BUB1BO60566 1050 aaPredicted RBP14.01□□□□□ -0.17
FN1-201ENST00000323926 PPP2R3AQ06190 1150 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 CCDC122Q5T0U0 273 aa14.01□□□□□ -0.17
FN1-201ENST00000323926 DNM3Q9UQ16 869 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms