RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 IFT20Q8IY31 132 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 RIMBP2O15034 1052 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 INTS8Q75QN2 995 aaKnown RBP17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 TUBBP07437 444 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 NOX5Q96PH1 765 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 GCC2Q8IWJ2 1684 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 SHANK2Q9UPX8 1470 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 NDUFA8P51970 172 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 SETDB1Q15047 1291 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 TTC6Q86TZ1 520 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 APPBP2Q92624 585 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 KIAA1468Q9P260 1216 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
SHROOM4-201ENST00000289292 GNA11P29992 359 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 CALCOCO2Q13137 446 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 KDM6BO15054 1643 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 CEP104O60308 925 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 FERP16591 822 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 TMTC1Q8IUR5 882 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 DDX12PQ92771 950 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 UHRF1BP1LA0JNW5 1464 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 ST5P78524 1137 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 SP4Q02446 784 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 ZNF790Q6PG37 636 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 SMC6Q96SB8 1091 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 CCDC65Q8IXS2 484 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 GPR161Q8N6U8 529 aaKnown RBP17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 PAXIP1Q6ZW49 1069 aaPredicted RBP17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
SHROOM4-201ENST00000289292 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 PLCD1P51178 756 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 DNAI2Q9GZS0 605 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 NELFCDQ8IXH7 590 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 PPP1R13BQ96KQ4 1090 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 PPANQ9NQ55 473 aaKnown RBP17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 EPB41P11171 864 aaKnown RBP17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 TTLL12Q14166 644 aaPredicted RBP17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 RGS12O14924 1447 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 KCNQ3O43525 872 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 FAM207AQ9NSI2 230 aaPredicted RBP17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 MAEAQ7L5Y9 396 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 DAAM2Q86T65 1068 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 MGARPQ8TDB4 240 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 PTPRTO14522 1441 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 ZNF532Q9HCE3 1301 aa17.12■□□□□ 0.33
SHROOM4-201ENST00000289292 ATP2A1O14983 1001 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 SPOPO43791 374 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 ATP11AP98196 1134 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 TNFAIP3P21580 790 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 HS2ST1Q7LGA3 356 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 PCK1P35558 622 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 ATP1A2P50993 1020 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 ADALQ6DHV7 355 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 AATFQ9NY61 560 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 KIF21AQ7Z4S6 1674 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 TUBB2AQ13885 445 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 IP6K1Q92551 441 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 TUBB2BQ9BVA1 445 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 GCP02774 474 aa17.11■□□□□ 0.33
SHROOM4-201ENST00000289292 KDM5CP41229 1560 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 ASXL2Q76L83 1435 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 GNGT1P63211 74 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 NKIRAS1Q9NYS0 192 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 CEP85LQ5SZL2 805 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 MYSM1Q5VVJ2 828 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 C11orf57Q6ZUT1 292 aaPredicted RBP17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 CFAP65Q6ZU64 1925 aaKnown RBP17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 A1BGP04217 495 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 ERCC5P28715 1186 aaPredicted RBP17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 SARNPP82979 210 aaKnown RBP17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 BUB1O43683 1085 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 MAGEA1P43355 309 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 FRMD4BQ9Y2L6 1034 aa17.1■□□□□ 0.33
SHROOM4-201ENST00000289292 IRX5P78411 483 aaPredicted RBP17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 SCRN1Q12765 414 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 RRAGAQ7L523 313 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms