RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 DBNDD2Q9BQY9 259 aa17.19■□□□□ 0.34
TPM1-202ENST00000288398 DHX36Q9H2U1 1008 aaKnown RBP17.19■□□□□ 0.34
TPM1-202ENST00000288398 AATFQ9NY61 560 aaKnown RBP eCLIP17.19■□□□□ 0.34
TPM1-202ENST00000288398 AGTPBP1Q9UPW5 1226 aa17.19■□□□□ 0.34
TPM1-202ENST00000288398 TNPO2O14787 897 aaKnown RBP17.18■□□□□ 0.34
TPM1-202ENST00000288398 PRKCZQ05513 592 aa17.18■□□□□ 0.34
TPM1-202ENST00000288398 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
TPM1-202ENST00000288398 ZNF280CQ8ND82 737 aa17.18■□□□□ 0.34
TPM1-202ENST00000288398 SH3RF3Q8TEJ3 882 aaPredicted RBP17.18■□□□□ 0.34
TPM1-202ENST00000288398 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
TPM1-202ENST00000288398 PI4KBQ9UBF8 816 aa17.18■□□□□ 0.34
TPM1-202ENST00000288398 ZSWIM8A7E2V4 1837 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 USP17L5A8MUK1 530 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 IGSF3O75054 1194 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 SLURP2P0DP57 97 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 CTGFP29279 349 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 SPP2Q13103 211 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
TPM1-202ENST00000288398 COA7Q96BR5 231 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 RNF208Q9H0X6 261 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 PCDH10Q9P2E7 1040 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 TAOK2Q9UL54 1235 aa17.17■□□□□ 0.34
TPM1-202ENST00000288398 CENPFP49454 3210 aa17.16■□□□□ 0.34
TPM1-202ENST00000288398 HLA-DOAP06340 250 aa17.16■□□□□ 0.34
TPM1-202ENST00000288398 CAP2P40123 477 aa17.16■□□□□ 0.34
TPM1-202ENST00000288398 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
TPM1-202ENST00000288398 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
TPM1-202ENST00000288398 TMOD4Q9NZQ9 345 aa17.16■□□□□ 0.34
TPM1-202ENST00000288398 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.16■□□□□ 0.34
TPM1-202ENST00000288398 MS4A1P11836 297 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 CCL5P13501 91 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 HMGCS2P54868 508 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 MTFR1Q15390 333 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 MAPKAPK5Q8IW41 473 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 MIER1Q8N108 512 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
TPM1-202ENST00000288398 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
TPM1-202ENST00000288398 ADCY3O60266 1144 aa17.14■□□□□ 0.33
TPM1-202ENST00000288398 IDH1O75874 414 aaKnown RBP17.14■□□□□ 0.33
TPM1-202ENST00000288398 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
TPM1-202ENST00000288398 ASNSP08243 561 aa17.14■□□□□ 0.33
TPM1-202ENST00000288398 CYP7A1P22680 504 aa17.14■□□□□ 0.33
TPM1-202ENST00000288398 ZAP70P43403 619 aa17.14■□□□□ 0.33
TPM1-202ENST00000288398 GCLCP48506 637 aaPredicted RBP17.14■□□□□ 0.33
TPM1-202ENST00000288398 TREML2Q5T2D2 321 aa17.14■□□□□ 0.33
TPM1-202ENST00000288398 CCDC8Q9H0W5 538 aaPredicted RBP17.14■□□□□ 0.33
TPM1-202ENST00000288398 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
TPM1-202ENST00000288398 MAST2Q6P0Q8 1798 aa17.14■□□□□ 0.33
TPM1-202ENST00000288398 ZBTB7BO15156 539 aaPredicted RBP17.13■□□□□ 0.33
TPM1-202ENST00000288398 GJB1P08034 283 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 FLT3LGP49771 235 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 PPP4CP60510 307 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 IRX3P78415 501 aaPredicted RBP17.13■□□□□ 0.33
TPM1-202ENST00000288398 FAM110CQ1W6H9 321 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 FOXP4Q8IVH2 680 aaPredicted RBP17.13■□□□□ 0.33
TPM1-202ENST00000288398 DPF3Q92784 378 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 HTATIP2Q9BUP3 242 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
TPM1-202ENST00000288398 GABRQQ9UN88 632 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 FLT1P17948 1338 aa17.13■□□□□ 0.33
TPM1-202ENST00000288398 USP5P45974 858 aa17.12■□□□□ 0.33
TPM1-202ENST00000288398 GJA8P48165 433 aa17.12■□□□□ 0.33
TPM1-202ENST00000288398 MAP3K12Q12852 859 aa17.12■□□□□ 0.33
TPM1-202ENST00000288398 HABP4Q5JVS0 413 aaKnown RBP17.12■□□□□ 0.33
TPM1-202ENST00000288398 PIH1D3Q9NQM4 214 aaKnown RBP17.12■□□□□ 0.33
TPM1-202ENST00000288398 GINM1Q9NU53 330 aa17.12■□□□□ 0.33
TPM1-202ENST00000288398 SAP30BPQ9UHR5 308 aaKnown RBP17.12■□□□□ 0.33
TPM1-202ENST00000288398 RLBP1P12271 317 aa17.11■□□□□ 0.33
TPM1-202ENST00000288398 MTMR2Q13614 643 aa17.11■□□□□ 0.33
TPM1-202ENST00000288398 AACSQ86V21 672 aa17.11■□□□□ 0.33
TPM1-202ENST00000288398 CCAR1Q8IX12 1150 aaKnown RBP17.11■□□□□ 0.33
TPM1-202ENST00000288398 PXYLP1Q8TE99 480 aa17.11■□□□□ 0.33
TPM1-202ENST00000288398 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
TPM1-202ENST00000288398 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
TPM1-202ENST00000288398 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
TPM1-202ENST00000288398 INHAP05111 366 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 ELNP15502 786 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 IRF5Q13568 498 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 TMED8Q6PL24 325 aaPredicted RBP17.1■□□□□ 0.33
TPM1-202ENST00000288398 ADGRA1Q86SQ6 560 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 EAF2Q96CJ1 260 aaPredicted RBP17.1■□□□□ 0.33
TPM1-202ENST00000288398 WDR18Q9BV38 432 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 ASCC2Q9H1I8 757 aaPredicted RBP17.1■□□□□ 0.33
TPM1-202ENST00000288398 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
TPM1-202ENST00000288398 C19orf81C9J6K1 198 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 USP17L10C9JJH3 530 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 HMMRO75330 724 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 GDF11O95390 407 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 TFRCP02786 760 aaKnown RBP17.09■□□□□ 0.33
TPM1-202ENST00000288398 CAPN2P17655 700 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 BACE1P56817 501 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 MIGA1Q8NAN2 632 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 PANK1Q8TE04 598 aa17.09■□□□□ 0.33
TPM1-202ENST00000288398 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms