RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 HINFPQ9BQA5 517 aa18.72■□□□□ 0.59
SCAP-201ENST00000265565 ROBO2Q9HCK4 1378 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 ADORA1P30542 326 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 COBLO75128 1261 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 ZMYM1Q5SVZ6 1142 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 OTUD6BQ8N6M0 293 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 NOC4LQ9BVI4 516 aaKnown RBP18.71■□□□□ 0.59
SCAP-201ENST00000265565 GNAQP50148 359 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 LETM2Q2VYF4 491 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 CSGALNACT2Q8N6G5 542 aa18.71■□□□□ 0.59
SCAP-201ENST00000265565 USP27XA6NNY8 438 aa18.7■□□□□ 0.58
SCAP-201ENST00000265565 DNAJC10Q8IXB1 793 aa18.7■□□□□ 0.58
SCAP-201ENST00000265565 MAST3O60307 1309 aa18.7■□□□□ 0.58
SCAP-201ENST00000265565 MED14O60244 1454 aa18.7■□□□□ 0.58
SCAP-201ENST00000265565 GSTTP1A0A1W2PQM5 241 aa18.7■□□□□ 0.58
SCAP-201ENST00000265565 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
SCAP-201ENST00000265565 PI16Q6UXB8 463 aa18.7■□□□□ 0.58
SCAP-201ENST00000265565 LDHCP07864 332 aa18.7■□□□□ 0.58
SCAP-201ENST00000265565 CLCN6P51797 869 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 PDE4DQ08499 809 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 AKNAD1Q5T1N1 836 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 CFAP58Q5T655 872 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 WWC3Q9ULE0 1092 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 LRRC7Q96NW7 1537 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 ANKRD62A6NC57 917 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 PUM3Q15397 648 aaKnown RBP18.69■□□□□ 0.58
SCAP-201ENST00000265565 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 KCNF1Q9H3M0 494 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 C19orf44Q9H6X5 657 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 USP6P35125 1406 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 C6orf229H3BNL8 230 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 EPHA10Q5JZY3 1008 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 CTNNBL1Q8WYA6 563 aaPredicted RBP18.69■□□□□ 0.58
SCAP-201ENST00000265565 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
SCAP-201ENST00000265565 UNC13BO14795 1591 aa18.68■□□□□ 0.58
SCAP-201ENST00000265565 OSBP2Q969R2 916 aa18.68■□□□□ 0.58
SCAP-201ENST00000265565 POLR3EQ9NVU0 708 aa18.68■□□□□ 0.58
SCAP-201ENST00000265565 ATP6V1AP38606 617 aa18.68■□□□□ 0.58
SCAP-201ENST00000265565 GRAMD1CQ8IYS0 662 aa18.68■□□□□ 0.58
SCAP-201ENST00000265565 PLEKHA4Q9H4M7 779 aa18.68■□□□□ 0.58
SCAP-201ENST00000265565 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
SCAP-201ENST00000265565 NELFBQ8WX92 580 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 TET3O43151 1660 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 STX10O60499 249 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 ZNF654Q8IZM8 581 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 PHKG2P15735 406 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 PDE6AP16499 860 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 TNNI2P48788 182 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 KIF23Q02241 960 aaPredicted RBP18.67■□□□□ 0.58
SCAP-201ENST00000265565 BRD3Q15059 726 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 GOLGA6CA6NDK9 693 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 GOLGA6DP0CG33 693 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 PDE11AQ9HCR9 933 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 GOLGA6AQ9NYA3 693 aa18.67■□□□□ 0.58
SCAP-201ENST00000265565 TUBB2AQ13885 445 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 KRT79Q5XKE5 535 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 TICAM2Q86XR7 235 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 TUBB2BQ9BVA1 445 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 TLDC2A0PJX2 215 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 NDUFAB1O14561 156 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 APOA5Q6Q788 366 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 SND1Q7KZF4 910 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCAP-201ENST00000265565 SPATA5Q8NB90 893 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 DDX41Q9UJV9 622 aaKnown RBP18.66■□□□□ 0.58
SCAP-201ENST00000265565 M0R2C6 588 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 TRIM14Q14142 442 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 GOLPH3LQ9H4A5 285 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 C6orf50Q9HD87 102 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 ZMYM6O95789 1325 aa18.66■□□□□ 0.58
SCAP-201ENST00000265565 TCIRG1Q13488 830 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 NBPF5PQ86XG9 351 aaPredicted RBP18.65■□□□□ 0.58
SCAP-201ENST00000265565 LPIN2Q92539 896 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 PLA2G4DQ86XP0 818 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 SMYD4Q8IYR2 804 aaPredicted RBP18.65■□□□□ 0.58
SCAP-201ENST00000265565 IFNL3Q8IZI9 196 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
SCAP-201ENST00000265565 TRAF5O00463 557 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 HPDP32754 393 aaPredicted RBP18.65■□□□□ 0.58
SCAP-201ENST00000265565 TERF2Q15554 542 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 CEP57Q86XR8 500 aa18.65■□□□□ 0.58
SCAP-201ENST00000265565 EFCAB6Q5THR3 1501 aa18.64■□□□□ 0.58
SCAP-201ENST00000265565 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.58
SCAP-201ENST00000265565 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.58
SCAP-201ENST00000265565 IKBKBO14920 756 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 LRRC27Q9C0I9 530 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 CROCC2H7BZ55 1655 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 GOLGA6BA6NDN3 693 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 SMIM23A6NLE4 172 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 PDE8AO60658 829 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 IGKV5-2P06315 115 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 CASP14P31944 242 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 KMT5BQ4FZB7 885 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 MEX3CQ5U5Q3 659 aaKnown RBP18.64■□□□□ 0.57
SCAP-201ENST00000265565 OR8K1Q8NGG5 319 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 SELENOOQ9BVL4 669 aa18.64■□□□□ 0.57
SCAP-201ENST00000265565 SAR1BQ9Y6B6 198 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms