RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 CASC4Q6P4E1 433 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 SPATA17Q96L03 361 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 CAPN9O14815 690 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 C21orf2O43822 256 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
SHANK3-201ENST00000262795 CERKLQ49MI3 558 aaPredicted RBP17.73■□□□□ 0.43
SHANK3-201ENST00000262795 CFAP157Q5JU67 520 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 TTC22Q5TAA0 569 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 CCDC155Q8N6L0 562 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 GIMAP6Q6P9H5 292 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 KCTD2Q14681 263 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 CTAGE5O15320 804 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 RNASE9P60153 205 aaKnown RBP17.73■□□□□ 0.43
SHANK3-201ENST00000262795 ANKFY1Q9P2R3 1169 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 RASAL2Q9UJF2 1139 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 V9GY48 417 aaPredicted RBP17.73■□□□□ 0.43
SHANK3-201ENST00000262795 PPP1R9BQ96SB3 815 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 SELENOSQ9BQE4 189 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
SHANK3-201ENST00000262795 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.73■□□□□ 0.43
SHANK3-201ENST00000262795 VGLL3A8MV65 326 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 KIFAP3Q92845 792 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 SYNDIG1Q9H7V2 258 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 RTEL1Q9NZ71 1219 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 MOSPD1Q9UJG1 213 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 ALDH1L1O75891 902 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 CCDC160A6NGH7 325 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 SCYL2Q6P3W7 929 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 TMEM106CQ9BVX2 250 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 TMCO4Q5TGY1 634 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 MRPL44Q9H9J2 332 aaKnown RBP17.72■□□□□ 0.43
SHANK3-201ENST00000262795 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
SHANK3-201ENST00000262795 SDSP20132 328 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 CHMP6Q96FZ7 201 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■■□□ 15.7
SHANK3-201ENST00000262795 V9GYY5 206 aaPredicted RBP17.71■□□□□ 0.43
SHANK3-201ENST00000262795 ADCY7P51828 1080 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 NELFCDQ8IXH7 590 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 SPATA5Q8NB90 893 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 DTNBO60941 627 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 GNPTABQ3T906 1256 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 XPAP23025 273 aaPredicted RBP17.71■□□□□ 0.43
SHANK3-201ENST00000262795 MIER3Q7Z3K6 550 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
SHANK3-201ENST00000262795 CMTR1Q8N1G2 835 aaKnown RBP17.71■□□□□ 0.42
SHANK3-201ENST00000262795 GPR101Q96P66 508 aaPredicted RBP17.71■□□□□ 0.42
SHANK3-201ENST00000262795 HINFPQ9BQA5 517 aa17.71■□□□□ 0.42
SHANK3-201ENST00000262795 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.42
SHANK3-201ENST00000262795 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 EXOC7Q9UPT5 735 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 CACYBPQ9HB71 228 aaKnown RBP17.7■□□□□ 0.42
SHANK3-201ENST00000262795 SYCP2Q9BX26 1530 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 CKAP4Q07065 602 aaKnown RBP17.7■□□□□ 0.42
SHANK3-201ENST00000262795 MAP3K19Q56UN5 1328 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 POLA2Q14181 598 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 RPS8P62241 208 aaKnown RBP17.7■□□□□ 0.42
SHANK3-201ENST00000262795 SUDS3Q9H7L9 328 aaPredicted RBP17.7■□□□□ 0.42
SHANK3-201ENST00000262795 MARK3P27448 753 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
SHANK3-201ENST00000262795 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
SHANK3-201ENST00000262795 ESYT2A0FGR8 921 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 GDF11O95390 407 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 TFAP4Q01664 338 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 NKX1-1Q15270 411 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-201ENST00000262795 C1orf228Q6PIY5 440 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 KIF18AQ8NI77 898 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 POLKQ9UBT6 870 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 SATB1Q01826 763 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 RAD50Q92878 1312 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 DKC1O60832 514 aaKnown RBP eCLIP17.69■□□□□ 0.428e-7■■■■■ 44.8
SHANK3-201ENST00000262795 GAS7O60861 476 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 GOLGA8HP0CJ92 632 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 MAN1A1P33908 653 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 ANGEL1Q9UNK9 670 aaKnown RBP17.69■□□□□ 0.42
SHANK3-201ENST00000262795 WDR62O43379 1518 aa17.69■□□□□ 0.42
SHANK3-201ENST00000262795 ATP2A1O14983 1001 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 SPOPO43791 374 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 SERPINB2P05120 415 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 CCNA1P78396 465 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 OTUD6AQ7L8S5 288 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 CSRNP1Q96S65 589 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 PPP1R12AO14974 1030 aaPredicted RBP17.68■□□□□ 0.42
SHANK3-201ENST00000262795 LMCD1Q9NZU5 365 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 ZSCAN20P17040 1043 aaPredicted RBP17.68■□□□□ 0.42
SHANK3-201ENST00000262795 BTDP43251 543 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 CALCRLQ16602 461 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 KCNK9Q9NPC2 374 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 DYNC1I1O14576 645 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 CALUO43852 315 aaPredicted RBP17.68■□□□□ 0.42
SHANK3-201ENST00000262795 TNFAIP3P21580 790 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 NUB1Q9Y5A7 615 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 ZNF518AQ6AHZ1 1483 aa17.68■□□□□ 0.42
SHANK3-201ENST00000262795 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms