RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 KIFC2Q96AC6 838 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.96■□□□□ 0.79
TRAM1-201ENST00000262213 WDR19Q8NEZ3 1342 aa19.96■□□□□ 0.79
TRAM1-201ENST00000262213 TEX33O43247 280 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 COBLO75128 1261 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 SAFBQ15424 915 aaKnown RBP eCLIP19.95■□□□□ 0.78
TRAM1-201ENST00000262213 MED15Q96RN5 788 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 ZSWIM5Q9P217 1185 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 FAM237AA0A1B0GTK4 181 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 VGLL3A8MV65 326 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 AFMP43652 599 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 GREM2Q9H772 168 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 PDE6AP16499 860 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 PHKA1P46020 1223 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 GOLGA1Q92805 767 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 ISCA1Q9BUE6 129 aa19.95■□□□□ 0.78
TRAM1-201ENST00000262213 C1orf167Q5SNV9 1468 aa19.94■□□□□ 0.78
TRAM1-201ENST00000262213 GOLGA6L9A6NEM1 432 aa19.94■□□□□ 0.78
TRAM1-201ENST00000262213 ITGA6P23229 1130 aa19.94■□□□□ 0.78
TRAM1-201ENST00000262213 TMEM87BQ96K49 555 aa19.94■□□□□ 0.78
TRAM1-201ENST00000262213 TEX13AQ9BXU3 409 aaPredicted RBP19.94■□□□□ 0.78
TRAM1-201ENST00000262213 RSRC2Q7L4I2 434 aaKnown RBP19.94■□□□□ 0.78
TRAM1-201ENST00000262213 NUP133Q8WUM0 1156 aa19.94■□□□□ 0.78
TRAM1-201ENST00000262213 FBXO2Q9UK22 296 aaPredicted RBP19.94■□□□□ 0.78
TRAM1-201ENST00000262213 MYO5AQ9Y4I1 1855 aaKnown RBP19.93■□□□□ 0.78
TRAM1-201ENST00000262213 TFRCP02786 760 aaKnown RBP19.93■□□□□ 0.78
TRAM1-201ENST00000262213 ZNF18P17022 549 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 ZCRB1Q8TBF4 217 aaKnown RBP19.93■□□□□ 0.78
TRAM1-201ENST00000262213 OXER1Q8TDS5 423 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 NAPBQ9H115 298 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 TOM1L2Q6ZVM7 507 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 CREBRFQ8IUR6 639 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 NUTM2AQ8IVF1 878 aaPredicted RBP19.93■□□□□ 0.78
TRAM1-201ENST00000262213 TBC1D2BQ9UPU7 963 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 TACC3Q9Y6A5 838 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 GLI3P10071 1580 aa19.93■□□□□ 0.78
TRAM1-201ENST00000262213 MMP1P03956 469 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 GTF2E1P29083 439 aaPredicted RBP19.92■□□□□ 0.78
TRAM1-201ENST00000262213 FAM193AP78312 1265 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 MORC3Q14149 939 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 SMYD4Q8IYR2 804 aaPredicted RBP19.92■□□□□ 0.78
TRAM1-201ENST00000262213 MLKLQ8NB16 471 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 ENOX1Q8TC92 643 aaKnown RBP19.92■□□□□ 0.78
TRAM1-201ENST00000262213 ARMT1Q9H993 441 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 AKR1B15C9JRZ8 316 aaPredicted RBP19.92■□□□□ 0.78
TRAM1-201ENST00000262213 SNAP23O00161 211 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 MYO1BO43795 1136 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 FMNL1O95466 1100 aaPredicted RBP19.92■□□□□ 0.78
TRAM1-201ENST00000262213 CCDC175P0C221 793 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 MCM6Q14566 821 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 LONRF2Q1L5Z9 754 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 RAD9BQ6WBX8 426 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 ZFP91Q96JP5 570 aaPredicted RBP19.92■□□□□ 0.78
TRAM1-201ENST00000262213 FUT8Q9BYC5 575 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 CSRNP2Q9H175 543 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 CABP5Q9NP86 173 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 DACH1Q9UI36 760 aa19.92■□□□□ 0.78
TRAM1-201ENST00000262213 MYH7P12883 1935 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 LAMB4A4D0S4 1761 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 NUP188Q5SRE5 1749 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 MBD4O95243 580 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 CAPN2P17655 700 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 PTPREP23469 700 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 RBL2Q08999 1139 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 PPFIBP1Q86W92 1011 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 RABGGTAQ92696 567 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 STRBPQ96SI9 672 aaKnown RBP19.91■□□□□ 0.78
TRAM1-201ENST00000262213 EPB41L4AQ9HCS5 686 aaPredicted RBP19.91■□□□□ 0.78
TRAM1-201ENST00000262213 RIPOR2Q9Y4F9 1068 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 RIC1Q4ADV7 1423 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 TMEM94Q12767 1356 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 FAM205CA6NFA0 338 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 PRKAB2O43741 272 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 HSPA2P54652 639 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 TRIM22Q8IYM9 498 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 IGSF22Q8N9C0 903 aa19.91■□□□□ 0.78
TRAM1-201ENST00000262213 ECM29Q5VYK3 1845 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 hCG_1642624A0A1W2PR95 340 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 CHMP4BP1P59074 171 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 KIF6Q6ZMV9 814 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 MAGEB6Q8N7X4 407 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 H3BQF6 201 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 PCCAP05165 728 aaPredicted RBP19.9■□□□□ 0.78
TRAM1-201ENST00000262213 TXLNAP40222 546 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 LMAN1P49257 510 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 NR1I3Q14994 352 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 RTN1Q16799 776 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 ZNF569Q5MCW4 686 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 IFNL3Q8IZI9 196 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 STAMQ92783 540 aa19.9■□□□□ 0.78
TRAM1-201ENST00000262213 TTF1Q15361 905 aaPredicted RBP19.89■□□□□ 0.78
TRAM1-201ENST00000262213 TXLNBQ8N3L3 684 aa19.89■□□□□ 0.78
TRAM1-201ENST00000262213 TTLL11Q8NHH1 800 aa19.89■□□□□ 0.78
TRAM1-201ENST00000262213 DDX60Q8IY21 1712 aaKnown RBP19.89■□□□□ 0.77
TRAM1-201ENST00000262213 ATF3P18847 181 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 PLCD1P51178 756 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 UBE3CQ15386 1083 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 EPSTI1Q96J88 318 aa19.89■□□□□ 0.77
TRAM1-201ENST00000262213 UBXN6Q9BZV1 441 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms