RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Usp28Q5I043 1051 aa17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Ddx31Q6NZQ2 687 aaKnown RBP17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Tbc1d5Q80XQ2 815 aa17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 DlatQ8BMF4 642 aa17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Cd248Q91V98 765 aa17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Zbed3Q9D0L1 228 aa17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Zbtb22Q9Z0G7 638 aa17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Col5a2Q3U962 1497 aa17.83■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Syce3B5KM66 88 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Fam186bD3Z420 943 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Calm1P0DP26 149 aaKnown RBP17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Calm2P0DP27 149 aaKnown RBP17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Calm3P0DP28 149 aaKnown RBP17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Usp53P15975 1069 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Traf3ip1Q149C2 625 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 VrtnQ3SYK4 740 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Tmtc2Q56A06 836 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Tekt3Q6X6Z7 490 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Kif1bpQ6ZPU9 617 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Samm50Q8BGH2 469 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Wasf1Q8R5H6 559 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Xrcc4Q924T3 326 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Mtfr1lQ9CWE0 289 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Ndufa8Q9DCJ5 172 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Myl3P09542 204 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Tbc1d2bQ3U0J8 965 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Acnat2Q8BGG9 420 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Cdk8Q8R3L8 464 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Stk39Q9Z1W9 556 aa17.82■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Zmym2Q9CU65 1376 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 VirmaA2AIV2 1811 aaKnown RBP17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Il7P10168 154 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Fam178bQ24JP3 464 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 LrmpQ60664 539 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 CrkQ64010 304 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 CbarpQ66L44 698 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Usp50Q6P8X6 390 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 SpidrQ8BGX7 933 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Cep89Q9CZX2 791 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 4933402E13RikQ9D4D2 429 aa17.81■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Aox4Q3TYQ9 1336 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Tbc1d8bA3KGB4 1114 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Dnm1P39053 867 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 MyrflQ3UN70 904 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Pip5kl1Q6U7H8 395 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Trmt2aQ8BNV1 574 aaKnown RBP17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Srek1Q8BZX4 494 aaKnown RBP17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 RabggtaQ9JHK4 567 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Vmn2r68L7N2B3 851 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Scg2Q03517 617 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Map3k12Q60700 888 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 GnptabQ69ZN6 1235 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Prkag3Q8BGM7 489 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Znrd1-asQ8R0E5 213 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Eif4enif1Q9EST3 983 aaKnown RBP17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Clip2Q9Z0H8 1047 aa17.8■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Ces1aE9PYP1 563 aa17.79■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Zbtb21E9Q444 1094 aa17.79■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Stx8O88983 236 aa17.79■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Eef2P58252 858 aaKnown RBP17.79■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Rc3h1Q4VGL6 1130 aaKnown RBP17.79■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Gimap7Q8R379 293 aa17.79■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Ubac1Q8VDI7 409 aa17.79■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Ccdc112A0AUP1 442 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 U2af2P26369 475 aaKnown RBP17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Eya3P97480 510 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Klhdc9Q3USL1 350 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Plxnb2B2RXS4 1842 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Zscan20B2KFW1 1030 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 1700013D24RikQ0P521 120 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Gm28047Q3US59 414 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Ncbp1Q3UYV9 790 aaKnown RBP17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 OplahQ8K010 1288 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Evc2Q8K1G2 1220 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 Col4a3bpQ9EQG9 624 aa17.78■□□□□ 0.44
Ldb3-208ENSMUST00000228044 TicrrQ8BQ33 1889 aa17.77■□□□□ 0.44
Ldb3-208ENSMUST00000228044 1700113H08RikE9Q9Q5 327 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Il4rP16382 810 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Vcam1P29533 739 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Cplx1P63040 134 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Large2Q5XPT3 690 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Casc1Q6TDU8 730 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Prpf3Q922U1 683 aaKnown RBP17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Glrx3Q9CQM9 337 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Mad2l2Q9D752 211 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Pik3ap1Q9EQ32 811 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Clic4Q9QYB1 253 aa17.77■□□□□ 0.43
Ldb3-208ENSMUST00000228044 A0A1Y7VML8 143 aa17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Arid4aF8VPQ2 1261 aaKnown RBP17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Spata18Q0P557 537 aa17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Vps37dQ810I0 261 aa17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Sec62Q8BU14 398 aaKnown RBP17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Rbm28Q8CGC6 750 aaKnown RBP17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Kcnj14Q8JZN3 434 aa17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Flt1P35969 1333 aa17.76■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Pcmtd1P59913 357 aa17.75■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Slc10a5Q5PT54 434 aa17.75■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Slc27a1Q60714 646 aa17.75■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Lamc2Q61092 1191 aa17.75■□□□□ 0.43
Ldb3-208ENSMUST00000228044 Bicd2Q921C5 820 aa17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms