RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Slc10a5Q5PT54 434 aa24.74■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Dynll2Q9D0M5 89 aa24.74■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Cnpy3Q9DAU1 276 aa24.74■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 GabreA2AMW3 916 aa24.73■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 NpcdF8VQB8 469 aa24.73■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 GmpsQ3THK7 693 aa24.73■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Ncbp1Q3UYV9 790 aaKnown RBP24.73■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Glis2Q8VDL9 521 aa24.73■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Sall1Q9ER74 1322 aa24.73■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Naaladl2A0A0N4SUJ3 795 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Fam186bD3Z420 943 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Gm20425E9Q035 978 aaKnown RBP24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 SrprbP47758 269 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Cplx2P84086 134 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Ckap2Q3V1H1 664 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Leo1Q5XJE5 667 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 GnptabQ69ZN6 1235 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Nup133Q8R0G9 1155 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Sirt2Q8VDQ8 389 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Rps12P63323 132 aaKnown RBP24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Cdkl5Q3UTQ8 938 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Pus7lQ8CE46 702 aa24.72■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Mical3Q8CJ19 1993 aa24.71■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Prr16A3KMN5 304 aa24.71■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 TbcaP48428 108 aaKnown RBP24.71■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Fam178bQ24JP3 464 aa24.71■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Aak1Q3UHJ0 959 aa24.71■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Ndufv1Q91YT0 464 aa24.71■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Zbed3Q9D0L1 228 aa24.71■■□□□ 1.55
Ccdc88a-202ENSMUST00000109477 Ppfia3P60469 1194 aa24.7■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Npr3P70180 536 aa24.7■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 VrtnQ3SYK4 740 aa24.7■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Lamc2Q61092 1191 aa24.7■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 U2af1l4Q8BGJ9 220 aa24.7■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ano1Q8BHY3 960 aa24.7■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Gm36210A0A1B0GS00 229 aa24.69■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 D1Pas1P16381 660 aa24.69■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Fdx1P46656 188 aa24.69■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ccdc66Q6NS45 935 aa24.69■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Trmt2aQ8BNV1 574 aaKnown RBP24.69■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 RabggtaQ9JHK4 567 aa24.69■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Mad1l1Q9WTX8 717 aaKnown RBP24.69■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Vmn2r68L7N2B3 851 aa24.68■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ftl1P29391 183 aa24.68■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Eef2P58252 858 aaKnown RBP24.68■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Foxp1P58462 705 aa24.68■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ccar2Q8VDP4 922 aaKnown RBP24.68■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Il7P10168 154 aa24.67■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Tekt3Q6X6Z7 490 aa24.67■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 DekQ7TNV0 380 aaKnown RBP24.67■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 DlatQ8BMF4 642 aa24.67■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Cdk8Q8R3L8 464 aa24.67■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Terf2ipQ91VL8 393 aa24.67■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Hdac9Q99N13 588 aa24.67■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ces1hD3Z298 562 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Nmt2O70311 529 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 FosbP13346 338 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 NyxP83503 476 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Wdr93Q402B2 695 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Rasgrp4Q8BTM9 673 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 DpydQ8CHR6 1025 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Tnip1Q9WUU8 647 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Plxnb2B2RXS4 1842 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Mknk2Q8CDB0 459 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Pdlim2Q8R1G6 349 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Znf287Q9EQB9 759 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Col24a1Q30D77 1733 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Peak1Q69Z38 1735 aa24.66■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 DaxxO35613 739 aa24.65■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 LyarQ08288 388 aaKnown RBP24.65■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Traf3ip1Q149C2 625 aa24.65■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Adgre1Q61549 931 aa24.65■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ppp2r5bQ6PD28 497 aa24.65■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Sept14Q9DA97 430 aa24.65■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Mageb2A2AHM0 380 aa24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ppef1O35655 650 aa24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Calm1P0DP26 149 aaKnown RBP24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Calm2P0DP27 149 aaKnown RBP24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Calm3P0DP28 149 aaKnown RBP24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Cap1P40124 474 aa24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Klhdc9Q3USL1 350 aa24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Rtn1Q8K0T0 780 aa24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Ndfip2Q91ZP6 311 aa24.64■■□□□ 1.54
Ccdc88a-202ENSMUST00000109477 Tmtc2Q56A06 836 aa24.64■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 R3hcc1Q8BSI6 488 aa24.64■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Yipf1Q91VU1 306 aa24.64■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Clip2Q9Z0H8 1047 aa24.64■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Usp53P15975 1069 aa24.63■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Mmp14P53690 582 aa24.63■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Eya3P97480 510 aa24.63■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Ranbp6Q8BIV3 1105 aa24.63■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Plcd3Q8K2J0 785 aa24.63■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Dpp7Q9ET22 506 aa24.63■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Cdc45Q9Z1X9 566 aa24.63■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Atp8b3Q6UQ17 1335 aa24.62■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Pde4aO89084 844 aa24.62■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Vcam1P29533 739 aa24.62■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Tigd5Q499M4 642 aa24.62■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Ppil2Q9D787 521 aa24.62■■□□□ 1.53
Ccdc88a-202ENSMUST00000109477 Zmym2Q9CU65 1376 aa24.62■■□□□ 1.53
Retrieved 100 of 22,080 RNA–protein pairs in 128.5 ms