RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Rnpc3Q3UZ01 514 aaKnown RBP14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Zc3h12cQ5DTV4 884 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Agtpbp1Q641K1 1218 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Pcdhga7Q6DD96 935 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Znf280cQ6P3Y5 742 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Trappc12Q8K2L8 797 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Kiaa1024Q8K3V7 917 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Gabbr1Q9WV18 960 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Rock2P70336 1388 aa14.67□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Btbd1P58544 488 aa14.66□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Tmem40Q4FJU9 225 aa14.66□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Gsdma3Q5Y4Y6 464 aa14.66□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Trim37Q6PCX9 961 aa14.66□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Bap1Q99PU7 728 aa14.66□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Capns2Q9D7J7 247 aa14.66□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Ttc41Q692V3 1318 aa14.66□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 ArafP04627 604 aa14.65□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Cap1P40124 474 aa14.65□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Cracr2aQ3UP38 310 aa14.65□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Kcnq5Q9JK45 933 aa14.65□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Stau1Q9Z108 487 aaKnown RBP14.65□□□□□ -0.06
Hmgb1-202ENSMUST00000093196 Tlr7P58681 1050 aa14.64□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Thsd4Q3UTY6 1018 aa14.64□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Fam198aQ3UY90 562 aa14.64□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Sytl5Q80T23 753 aa14.64□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 1700020D05RikQ99PB1 294 aa14.64□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Cacna1hO88427 2365 aa14.64□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 BcorQ8CGN4 1759 aa14.64□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 SktA2AQ25 1946 aaKnown RBP14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Cdk2ap1O35207 114 aa14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Btg4O70552 250 aa14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Gm2163Q6PCY5 473 aa14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Dlgap3Q6PFD5 977 aa14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Usp38Q8BW70 1042 aa14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Psma6Q9QUM9 246 aa14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Tbc1d8Q9Z1A9 1134 aa14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Orc1Q9Z1N2 840 aaKnown RBP14.63□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Dicer1Q8R418 1916 aa14.62□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 PdgfrbP05622 1098 aa14.62□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Eva1cP58659 440 aa14.62□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Adam1aQ60813 791 aa14.62□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Trnp1Q80ZI1 223 aa14.62□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 DcpsQ9DAR7 338 aa14.62□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 ColqO35348 457 aa14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Prkg1P0C605 671 aa14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 CbarpQ66L44 698 aa14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Pdzrn3Q69ZS0 1063 aa14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Zswim3Q8CFL8 695 aa14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Tcerg1Q8CGF7 1100 aaKnown RBP14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 HypkQ9CR41 129 aa14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Wdr33Q8K4P0 1330 aaKnown RBP14.61□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 SpegQ62407 3262 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 GabreA2AMW3 916 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Klhl33G3UW92 533 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Nme2Q01768 152 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Rtkn2Q14B46 604 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Ap4e1Q80V94 1122 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Ddx27Q921N6 760 aaKnown RBP14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Btbd19S4R1I0 287 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Dnah12Q3V0Q1 3086 aa14.6□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Cyp2c37P56654 490 aa14.59□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Cyp2c54Q6XVG2 490 aa14.59□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Galnt12Q8BGT9 576 aa14.59□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Cyp2c50Q91X77 490 aa14.59□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Ndfip2Q91ZP6 311 aa14.59□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Lrp8Q924X6 996 aa14.59□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 Gdf11Q9Z1W4 405 aa14.59□□□□□ -0.07
Hmgb1-202ENSMUST00000093196 PnisrA2AJT4 805 aaKnown RBP14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 SafbD3YXK2 937 aaKnown RBP14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Otud5Q3U2S4 566 aa14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Rnf223Q3UV31 285 aa14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Eif1aQ60872 144 aaKnown RBP14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Eif1axQ8BMJ3 144 aaKnown RBP14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Lmod1Q8BVA4 595 aa14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Phf20l1Q8CCJ9 1013 aa14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 MyocdQ8VIM5 935 aa14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Foxo3Q9WVH4 672 aa14.58□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 AaasP58742 546 aa14.57□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 NfixP70257 488 aa14.57□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Sh2d1b2Q45HK4 132 aa14.57□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Ddx49Q4FZF3 480 aaKnown RBP14.57□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Lman1lQ8VCD3 505 aa14.57□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Lmcd1Q8VEE1 365 aa14.57□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Zfp804bA0A0G2JGH6 1343 aa14.57□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Speer4f2E9Q366 295 aa14.56□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Clec11aO88200 328 aa14.56□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Cbx2P30658 519 aa14.56□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Dnajc22Q8CHS2 339 aa14.56□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Ufsp1Q9CZP0 217 aa14.56□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Aldh1b1Q9CZS1 519 aa14.56□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Gm13101A2ASJ0 481 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Pramef17A2ASJ1 475 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Krt28A6BLY7 462 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Epha4Q03137 986 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Ttyh1Q9D3A9 450 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Syt5Q9R0N5 386 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Col12a1Q60847 3120 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Phrf1A6H619 1682 aa14.55□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Dmrtb1A2A9I7 359 aa14.54□□□□□ -0.08
Hmgb1-202ENSMUST00000093196 Btn2a2A4QPC6 514 aa14.54□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms