Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Gm25239-201ENSMUST00000174915 86 ntBASIC44.57■■■■■ 4.73
Zswim3Q8CFL8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.49■■■■■ 4.23
Zswim3Q8CFL8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.83■■■■■ 4.13
Zswim3Q8CFL8 Gm24109-201ENSMUST00000175489 103 ntBASIC38.91■■■■□ 3.82
Zswim3Q8CFL8 Gm15042-201ENSMUST00000120212 883 ntBASIC38.36■■■■□ 3.73
Zswim3Q8CFL8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.68■■■■□ 3.62
Zswim3Q8CFL8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
Zswim3Q8CFL8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Zswim3Q8CFL8 Gm15045-201ENSMUST00000117359 883 ntBASIC37.42■■■■□ 3.58
Zswim3Q8CFL8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Zswim3Q8CFL8 Gm23366-201ENSMUST00000175022 89 ntBASIC37.14■■■■□ 3.54
Zswim3Q8CFL8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.5■■■■□ 3.43
Zswim3Q8CFL8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.18■■■■□ 3.38
Zswim3Q8CFL8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Zswim3Q8CFL8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.11■■■■□ 3.37
Zswim3Q8CFL8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Zswim3Q8CFL8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Zswim3Q8CFL8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
Zswim3Q8CFL8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Zswim3Q8CFL8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.43■■■■□ 3.26
Zswim3Q8CFL8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Zswim3Q8CFL8 Gm25238-201ENSMUST00000174914 89 ntBASIC35.37■■■■□ 3.25
Zswim3Q8CFL8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Zswim3Q8CFL8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Zswim3Q8CFL8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.69■■■■□ 3.14
Zswim3Q8CFL8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
Zswim3Q8CFL8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Zswim3Q8CFL8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
Zswim3Q8CFL8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Zswim3Q8CFL8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.19■■■■□ 3.06
Zswim3Q8CFL8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Zswim3Q8CFL8 Gm25262-201ENSMUST00000174934 133 ntBASIC34.18■■■■□ 3.06
Zswim3Q8CFL8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.13■■■■□ 3.05
Zswim3Q8CFL8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.1■■■■□ 3.05
Zswim3Q8CFL8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.02■■■■□ 3.04
Zswim3Q8CFL8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.85■■■■□ 3.01
Zswim3Q8CFL8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Zswim3Q8CFL8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.78■■■■□ 3
Zswim3Q8CFL8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.77■■■■□ 3
Zswim3Q8CFL8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.74■■■□□ 2.99
Zswim3Q8CFL8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Zswim3Q8CFL8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.63■■■□□ 2.97
Zswim3Q8CFL8 Gm26115-201ENSMUST00000175605 87 ntBASIC33.58■■■□□ 2.97
Zswim3Q8CFL8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.57■■■□□ 2.96
Zswim3Q8CFL8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.56■■■□□ 2.96
Zswim3Q8CFL8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
Zswim3Q8CFL8 Gm27325-201ENSMUST00000175467 74 ntBASIC33.51■■■□□ 2.95
Zswim3Q8CFL8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Zswim3Q8CFL8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Zswim3Q8CFL8 Gm8109-201ENSMUST00000194076 746 ntBASIC33.31■■■□□ 2.92
Zswim3Q8CFL8 Rab21-202ENSMUST00000218831 843 ntBASIC33.31■■■□□ 2.92
Zswim3Q8CFL8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.28■■■□□ 2.92
Zswim3Q8CFL8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Zswim3Q8CFL8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Zswim3Q8CFL8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Zswim3Q8CFL8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33■■■□□ 2.87
Zswim3Q8CFL8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Zswim3Q8CFL8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Zswim3Q8CFL8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.87■■■□□ 2.85
Zswim3Q8CFL8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
Zswim3Q8CFL8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Zswim3Q8CFL8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.73■■■□□ 2.83
Zswim3Q8CFL8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Zswim3Q8CFL8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.64■■■□□ 2.82
Zswim3Q8CFL8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.58■■■□□ 2.81
Zswim3Q8CFL8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Zswim3Q8CFL8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.56■■■□□ 2.8
Zswim3Q8CFL8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Zswim3Q8CFL8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Zswim3Q8CFL8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Zswim3Q8CFL8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Zswim3Q8CFL8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.29■■■□□ 2.76
Zswim3Q8CFL8 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.29■■■□□ 2.76
Zswim3Q8CFL8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Zswim3Q8CFL8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Zswim3Q8CFL8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Zswim3Q8CFL8 Psd-208ENSMUST00000224556 2034 ntBASIC32.22■■■□□ 2.75
Zswim3Q8CFL8 Gm24804-201ENSMUST00000174982 85 ntBASIC32.2■■■□□ 2.75
Zswim3Q8CFL8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Zswim3Q8CFL8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Zswim3Q8CFL8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.03■■■□□ 2.72
Zswim3Q8CFL8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
Zswim3Q8CFL8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Zswim3Q8CFL8 Gm27322-201ENSMUST00000184007 104 ntBASIC31.88■■■□□ 2.69
Zswim3Q8CFL8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.88■■■□□ 2.69
Zswim3Q8CFL8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.86■■■□□ 2.69
Zswim3Q8CFL8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.86■■■□□ 2.69
Zswim3Q8CFL8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.85■■■□□ 2.69
Zswim3Q8CFL8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.84■■■□□ 2.69
Zswim3Q8CFL8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
Zswim3Q8CFL8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.75■■■□□ 2.67
Zswim3Q8CFL8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Zswim3Q8CFL8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Zswim3Q8CFL8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.71■■■□□ 2.67
Zswim3Q8CFL8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.69■■■□□ 2.66
Zswim3Q8CFL8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Zswim3Q8CFL8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Zswim3Q8CFL8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Zswim3Q8CFL8 Zfp131-205ENSMUST00000223812 663 ntBASIC31.59■■■□□ 2.65
Zswim3Q8CFL8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms