RNA–Protein interactions for RNA: ENST00000642118.1

CASC19-281, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,554 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-281ENST00000642118 NDUFC1O43677 76 aa2.55□□□□□ -2
CASC19-281ENST00000642118 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
CASC19-281ENST00000642118 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
CASC19-281ENST00000642118 CYSTM1Q9H1C7 97 aa2.54□□□□□ -2
CASC19-281ENST00000642118 H7BZZ5 65 aa2.53□□□□□ -2
CASC19-281ENST00000642118 SPTSSBQ8NFR3 76 aa2.49□□□□□ -2.01
CASC19-281ENST00000642118 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
CASC19-281ENST00000642118 ATP5EP56381 51 aaPredicted RBP2.48□□□□□ -2.01
CASC19-281ENST00000642118 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
CASC19-281ENST00000642118 ACYP2P14621 99 aa2.47□□□□□ -2.01
CASC19-281ENST00000642118 H1FX-AS1Q4G0G2 97 aa2.45□□□□□ -2.02
CASC19-281ENST00000642118 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
CASC19-281ENST00000642118 INE1O15225 51 aa2.44□□□□□ -2.02
CASC19-281ENST00000642118 CHKB-CPT1BH3BT56 60 aa2.43□□□□□ -2.02
CASC19-281ENST00000642118 KRTAP13-4Q3LI77 160 aa2.43□□□□□ -2.02
CASC19-281ENST00000642118 S4R3F8 94 aa2.41□□□□□ -2.02
CASC19-281ENST00000642118 NEBP20929 6669 aa2.41□□□□□ -2.02
CASC19-281ENST00000642118 MUC12Q9UKN1 5478 aa2.37□□□□□ -2.03
CASC19-281ENST00000642118 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
CASC19-281ENST00000642118 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.03
CASC19-281ENST00000642118 Q5VV11 94 aa2.33□□□□□ -2.04
CASC19-281ENST00000642118 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
CASC19-281ENST00000642118 A0A1B0GU69 56 aa2.32□□□□□ -2.04
CASC19-281ENST00000642118 LINC01558Q9Y6Z2 57 aa2.32□□□□□ -2.04
CASC19-281ENST00000642118 H0YAA0 97 aa2.31□□□□□ -2.04
CASC19-281ENST00000642118 MT1BP07438 61 aa2.31□□□□□ -2.04
CASC19-281ENST00000642118 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
CASC19-281ENST00000642118 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
CASC19-281ENST00000642118 PRR15LQ9BU68 103 aa2.3□□□□□ -2.04
CASC19-281ENST00000642118 KRTAP19-8Q3LI54 63 aa2.28□□□□□ -2.04
CASC19-281ENST00000642118 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
CASC19-281ENST00000642118 KMT2DO14686 5537 aa2.27□□□□□ -2.05
CASC19-281ENST00000642118 KRTAP2-3P0C7H8 128 aa2.24□□□□□ -2.05
CASC19-281ENST00000642118 KRTAP2-4Q9BYR9 128 aa2.24□□□□□ -2.05
CASC19-281ENST00000642118 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
CASC19-281ENST00000642118 M0QZ58 72 aa2.23□□□□□ -2.05
CASC19-281ENST00000642118 UQCR11O14957 56 aa2.23□□□□□ -2.05
CASC19-281ENST00000642118 SPRR2EP22531 72 aa2.21□□□□□ -2.06
CASC19-281ENST00000642118 SPRR2BP35325 72 aa2.21□□□□□ -2.06
CASC19-281ENST00000642118 SPRR2AP35326 72 aa2.21□□□□□ -2.06
CASC19-281ENST00000642118 SPATA8Q6RVD6 105 aa2.21□□□□□ -2.06
CASC19-281ENST00000642118 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
CASC19-281ENST00000642118 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
CASC19-281ENST00000642118 A0A0D9SG42 100 aa2.18□□□□□ -2.06
CASC19-281ENST00000642118 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
CASC19-281ENST00000642118 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
CASC19-281ENST00000642118 PLAC4Q8WY50 150 aa2.15□□□□□ -2.06
CASC19-281ENST00000642118 SPRR2DP22532 72 aa2.15□□□□□ -2.07
CASC19-281ENST00000642118 MT1XP80297 61 aa2.14□□□□□ -2.07
CASC19-281ENST00000642118 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CASC19-281ENST00000642118 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
CASC19-281ENST00000642118 C10orf95Q9H7T3 257 aa2.01□□□□□ -2.09
CASC19-281ENST00000642118 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
CASC19-281ENST00000642118 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
CASC19-281ENST00000642118 TNP1P09430 55 aa1.98□□□□□ -2.09
CASC19-281ENST00000642118 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
CASC19-281ENST00000642118 MT1EP04732 61 aa1.91□□□□□ -2.1
CASC19-281ENST00000642118 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
CASC19-281ENST00000642118 MT4P47944 62 aa1.89□□□□□ -2.11
CASC19-281ENST00000642118 MT1GP13640 62 aa1.86□□□□□ -2.11
CASC19-281ENST00000642118 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
CASC19-281ENST00000642118 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
CASC19-281ENST00000642118 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
CASC19-281ENST00000642118 MT1MQ8N339 61 aa1.82□□□□□ -2.12
CASC19-281ENST00000642118 MT1LQ93083 61 aa1.81□□□□□ -2.12
CASC19-281ENST00000642118 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
CASC19-281ENST00000642118 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
CASC19-281ENST00000642118 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
CASC19-281ENST00000642118 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
CASC19-281ENST00000642118 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
CASC19-281ENST00000642118 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
CASC19-281ENST00000642118 MT1AP04731 61 aa1.53□□□□□ -2.16
CASC19-281ENST00000642118 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
CASC19-281ENST00000642118 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
CASC19-281ENST00000642118 PRM1P04553 51 aa1.04□□□□□ -2.24
CASC19-281ENST00000642118 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
CASC19-281ENST00000642118 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 86.2 ms