RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
PHGDH-226ENST00000641756 INE1O15225 51 aa6.08□□□□□ -1.44
PHGDH-226ENST00000641756 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
PHGDH-226ENST00000641756 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
PHGDH-226ENST00000641756 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
PHGDH-226ENST00000641756 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
PHGDH-226ENST00000641756 MT1MQ8N339 61 aa5.95□□□□□ -1.46
PHGDH-226ENST00000641756 MT1GP13640 62 aa5.95□□□□□ -1.46
PHGDH-226ENST00000641756 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
PHGDH-226ENST00000641756 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
PHGDH-226ENST00000641756 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
PHGDH-226ENST00000641756 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
PHGDH-226ENST00000641756 LCE5AQ5TCM9 118 aa5.84□□□□□ -1.47
PHGDH-226ENST00000641756 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
PHGDH-226ENST00000641756 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
PHGDH-226ENST00000641756 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
PHGDH-226ENST00000641756 KRTAP5-9P26371 169 aa5.67□□□□□ -1.5
PHGDH-226ENST00000641756 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
PHGDH-226ENST00000641756 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
PHGDH-226ENST00000641756 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
PHGDH-226ENST00000641756 SPRR2EP22531 72 aa5.54□□□□□ -1.52
PHGDH-226ENST00000641756 SPRR2BP35325 72 aa5.54□□□□□ -1.52
PHGDH-226ENST00000641756 SPRR2AP35326 72 aa5.54□□□□□ -1.52
PHGDH-226ENST00000641756 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
PHGDH-226ENST00000641756 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
PHGDH-226ENST00000641756 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
PHGDH-226ENST00000641756 SPRR2DP22532 72 aa5.32□□□□□ -1.56
PHGDH-226ENST00000641756 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
PHGDH-226ENST00000641756 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
PHGDH-226ENST00000641756 MT1AP04731 61 aa5.29□□□□□ -1.56
PHGDH-226ENST00000641756 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
PHGDH-226ENST00000641756 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
PHGDH-226ENST00000641756 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.58
PHGDH-226ENST00000641756 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
PHGDH-226ENST00000641756 NEBP20929 6669 aa5.03□□□□□ -1.6
PHGDH-226ENST00000641756 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
PHGDH-226ENST00000641756 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
PHGDH-226ENST00000641756 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
PHGDH-226ENST00000641756 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
PHGDH-226ENST00000641756 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
PHGDH-226ENST00000641756 MT3P25713 68 aa4.77□□□□□ -1.65
PHGDH-226ENST00000641756 MT4P47944 62 aa4.69□□□□□ -1.66
PHGDH-226ENST00000641756 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
PHGDH-226ENST00000641756 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
PHGDH-226ENST00000641756 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
PHGDH-226ENST00000641756 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
PHGDH-226ENST00000641756 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
PHGDH-226ENST00000641756 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
PHGDH-226ENST00000641756 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
PHGDH-226ENST00000641756 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
PHGDH-226ENST00000641756 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
PHGDH-226ENST00000641756 PRM1P04553 51 aa4.45□□□□□ -1.7
PHGDH-226ENST00000641756 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
PHGDH-226ENST00000641756 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
PHGDH-226ENST00000641756 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
PHGDH-226ENST00000641756 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
PHGDH-226ENST00000641756 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
PHGDH-226ENST00000641756 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
PHGDH-226ENST00000641756 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
PHGDH-226ENST00000641756 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
PHGDH-226ENST00000641756 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
PHGDH-226ENST00000641756 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
PHGDH-226ENST00000641756 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
PHGDH-226ENST00000641756 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
PHGDH-226ENST00000641756 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
PHGDH-226ENST00000641756 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
PHGDH-226ENST00000641756 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
PHGDH-226ENST00000641756 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
PHGDH-226ENST00000641756 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
PHGDH-226ENST00000641756 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
PHGDH-226ENST00000641756 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
PHGDH-226ENST00000641756 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
PHGDH-226ENST00000641756 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
PHGDH-226ENST00000641756 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
PHGDH-226ENST00000641756 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
PHGDH-226ENST00000641756 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
PHGDH-226ENST00000641756 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PHGDH-226ENST00000641756 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 108.5 ms