RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 MT1MQ8N339 61 aa4.58□□□□□ -1.68
HNRNPU-226ENST00000640218 ABCA13Q86UQ4 5058 aa4.57□□□□□ -1.68
HNRNPU-226ENST00000640218 FLGP20930 4061 aaPredicted RBP4.56□□□□□ -1.68
HNRNPU-226ENST00000640218 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
HNRNPU-226ENST00000640218 PCLOQ9Y6V0 5065 aa4.55□□□□□ -1.68
HNRNPU-226ENST00000640218 MT3P25713 68 aa4.54□□□□□ -1.68
HNRNPU-226ENST00000640218 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
HNRNPU-226ENST00000640218 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
HNRNPU-226ENST00000640218 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
HNRNPU-226ENST00000640218 PRM1P04553 51 aa4.47□□□□□ -1.69
HNRNPU-226ENST00000640218 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
HNRNPU-226ENST00000640218 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.71
HNRNPU-226ENST00000640218 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.71
HNRNPU-226ENST00000640218 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
HNRNPU-226ENST00000640218 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-226ENST00000640218 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-226ENST00000640218 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
HNRNPU-226ENST00000640218 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
HNRNPU-226ENST00000640218 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
HNRNPU-226ENST00000640218 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
HNRNPU-226ENST00000640218 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
HNRNPU-226ENST00000640218 MUC2Q02817 5179 aa4.36□□□□□ -1.71
HNRNPU-226ENST00000640218 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
HNRNPU-226ENST00000640218 MT1AP04731 61 aa4.24□□□□□ -1.73
HNRNPU-226ENST00000640218 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
HNRNPU-226ENST00000640218 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
HNRNPU-226ENST00000640218 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
HNRNPU-226ENST00000640218 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
HNRNPU-226ENST00000640218 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
HNRNPU-226ENST00000640218 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
HNRNPU-226ENST00000640218 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
HNRNPU-226ENST00000640218 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
HNRNPU-226ENST00000640218 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
HNRNPU-226ENST00000640218 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
HNRNPU-226ENST00000640218 LCE4AQ5TA78 99 aa4□□□□□ -1.77
HNRNPU-226ENST00000640218 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
HNRNPU-226ENST00000640218 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
HNRNPU-226ENST00000640218 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
HNRNPU-226ENST00000640218 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
HNRNPU-226ENST00000640218 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
HNRNPU-226ENST00000640218 USH2AO75445 5202 aa3.59□□□□□ -1.83
HNRNPU-226ENST00000640218 KMT2DO14686 5537 aa3.58□□□□□ -1.84
HNRNPU-226ENST00000640218 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
HNRNPU-226ENST00000640218 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
HNRNPU-226ENST00000640218 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
HNRNPU-226ENST00000640218 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
HNRNPU-226ENST00000640218 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
HNRNPU-226ENST00000640218 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
HNRNPU-226ENST00000640218 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
HNRNPU-226ENST00000640218 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
HNRNPU-226ENST00000640218 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
HNRNPU-226ENST00000640218 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
HNRNPU-226ENST00000640218 NEBP20929 6669 aa3.24□□□□□ -1.89
HNRNPU-226ENST00000640218 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
HNRNPU-226ENST00000640218 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
HNRNPU-226ENST00000640218 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
HNRNPU-226ENST00000640218 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
HNRNPU-226ENST00000640218 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
HNRNPU-226ENST00000640218 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
HNRNPU-226ENST00000640218 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
HNRNPU-226ENST00000640218 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
HNRNPU-226ENST00000640218 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
HNRNPU-226ENST00000640218 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
HNRNPU-226ENST00000640218 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
HNRNPU-226ENST00000640218 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
HNRNPU-226ENST00000640218 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
HNRNPU-226ENST00000640218 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.05
HNRNPU-226ENST00000640218 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
HNRNPU-226ENST00000640218 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
HNRNPU-226ENST00000640218 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
HNRNPU-226ENST00000640218 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
HNRNPU-226ENST00000640218 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
HNRNPU-226ENST00000640218 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
HNRNPU-226ENST00000640218 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
HNRNPU-226ENST00000640218 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
HNRNPU-226ENST00000640218 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
HNRNPU-226ENST00000640218 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 93.7 ms