RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
SPIN3-236ENST00000640131 MT1EP04732 61 aa4.26□□□□□ -1.73
SPIN3-236ENST00000640131 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
SPIN3-236ENST00000640131 MT1LQ93083 61 aa4.24□□□□□ -1.73
SPIN3-236ENST00000640131 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
SPIN3-236ENST00000640131 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
SPIN3-236ENST00000640131 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
SPIN3-236ENST00000640131 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
SPIN3-236ENST00000640131 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
SPIN3-236ENST00000640131 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SPIN3-236ENST00000640131 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
SPIN3-236ENST00000640131 MT1GP13640 62 aa4.06□□□□□ -1.76
SPIN3-236ENST00000640131 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
SPIN3-236ENST00000640131 KRTAP4-6Q9BYQ5 205 aa4.01□□□□□ -1.77
SPIN3-236ENST00000640131 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
SPIN3-236ENST00000640131 MT1MQ8N339 61 aa4□□□□□ -1.77
SPIN3-236ENST00000640131 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
SPIN3-236ENST00000640131 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
SPIN3-236ENST00000640131 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
SPIN3-236ENST00000640131 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.78
SPIN3-236ENST00000640131 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
SPIN3-236ENST00000640131 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
SPIN3-236ENST00000640131 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
SPIN3-236ENST00000640131 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.8
SPIN3-236ENST00000640131 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
SPIN3-236ENST00000640131 PRM1P04553 51 aa3.74□□□□□ -1.81
SPIN3-236ENST00000640131 SPRR2EP22531 72 aa3.72□□□□□ -1.81
SPIN3-236ENST00000640131 SPRR2BP35325 72 aa3.72□□□□□ -1.81
SPIN3-236ENST00000640131 SPRR2AP35326 72 aa3.72□□□□□ -1.81
SPIN3-236ENST00000640131 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
SPIN3-236ENST00000640131 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
SPIN3-236ENST00000640131 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
SPIN3-236ENST00000640131 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
SPIN3-236ENST00000640131 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.82
SPIN3-236ENST00000640131 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
SPIN3-236ENST00000640131 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
SPIN3-236ENST00000640131 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
SPIN3-236ENST00000640131 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
SPIN3-236ENST00000640131 SPRR2DP22532 72 aa3.55□□□□□ -1.84
SPIN3-236ENST00000640131 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
SPIN3-236ENST00000640131 MT1AP04731 61 aa3.51□□□□□ -1.85
SPIN3-236ENST00000640131 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
SPIN3-236ENST00000640131 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
SPIN3-236ENST00000640131 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
SPIN3-236ENST00000640131 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
SPIN3-236ENST00000640131 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SPIN3-236ENST00000640131 NEBP20929 6669 aa3.31□□□□□ -1.88
SPIN3-236ENST00000640131 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
SPIN3-236ENST00000640131 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
SPIN3-236ENST00000640131 MT4P47944 62 aa3.24□□□□□ -1.89
SPIN3-236ENST00000640131 MT3P25713 68 aa3.17□□□□□ -1.9
SPIN3-236ENST00000640131 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
SPIN3-236ENST00000640131 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
SPIN3-236ENST00000640131 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SPIN3-236ENST00000640131 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
SPIN3-236ENST00000640131 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
SPIN3-236ENST00000640131 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
SPIN3-236ENST00000640131 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
SPIN3-236ENST00000640131 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
SPIN3-236ENST00000640131 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
SPIN3-236ENST00000640131 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
SPIN3-236ENST00000640131 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SPIN3-236ENST00000640131 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
SPIN3-236ENST00000640131 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
SPIN3-236ENST00000640131 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
SPIN3-236ENST00000640131 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
SPIN3-236ENST00000640131 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
SPIN3-236ENST00000640131 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
SPIN3-236ENST00000640131 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
SPIN3-236ENST00000640131 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SPIN3-236ENST00000640131 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SPIN3-236ENST00000640131 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
SPIN3-236ENST00000640131 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.05
SPIN3-236ENST00000640131 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
SPIN3-236ENST00000640131 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
SPIN3-236ENST00000640131 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
SPIN3-236ENST00000640131 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
SPIN3-236ENST00000640131 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 76 ms