RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
PTP4A1-207ENST00000639568 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
PTP4A1-207ENST00000639568 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
PTP4A1-207ENST00000639568 ACYP2P14621 99 aa3.35□□□□□ -1.87
PTP4A1-207ENST00000639568 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
PTP4A1-207ENST00000639568 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
PTP4A1-207ENST00000639568 TNP1P09430 55 aa3.29□□□□□ -1.88
PTP4A1-207ENST00000639568 H3BPC8 53 aa3.28□□□□□ -1.88
PTP4A1-207ENST00000639568 ATP5EP2Q5VTU8 51 aa3.28□□□□□ -1.88
PTP4A1-207ENST00000639568 PRO0461Q9UI25 63 aa3.27□□□□□ -1.89
PTP4A1-207ENST00000639568 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
PTP4A1-207ENST00000639568 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
PTP4A1-207ENST00000639568 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
PTP4A1-207ENST00000639568 A8MU10 97 aa3.23□□□□□ -1.89
PTP4A1-207ENST00000639568 MT1AP04731 61 aa3.22□□□□□ -1.89
PTP4A1-207ENST00000639568 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
PTP4A1-207ENST00000639568 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
PTP4A1-207ENST00000639568 SPATA8Q6RVD6 105 aa3.19□□□□□ -1.9
PTP4A1-207ENST00000639568 SCGB1A1P11684 91 aa3.16□□□□□ -1.9
PTP4A1-207ENST00000639568 ETDBQ3ZM63 59 aa3.16□□□□□ -1.9
PTP4A1-207ENST00000639568 F8W1H4 67 aa3.09□□□□□ -1.91
PTP4A1-207ENST00000639568 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
PTP4A1-207ENST00000639568 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
PTP4A1-207ENST00000639568 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
PTP4A1-207ENST00000639568 A0A1B0GU33 70 aa3.06□□□□□ -1.92
PTP4A1-207ENST00000639568 FAM240AA0A1B0GVK7 77 aa3.06□□□□□ -1.92
PTP4A1-207ENST00000639568 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
PTP4A1-207ENST00000639568 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
PTP4A1-207ENST00000639568 GTF2H5Q6ZYL4 71 aa3.03□□□□□ -1.92
PTP4A1-207ENST00000639568 LINC00643Q86TS7 51 aa3.03□□□□□ -1.92
PTP4A1-207ENST00000639568 SMIM26A0A096LP01 95 aa2.99□□□□□ -1.93
PTP4A1-207ENST00000639568 SMIM6P0DI80 62 aa2.99□□□□□ -1.93
PTP4A1-207ENST00000639568 COL5A1-AS1Q5SY13 56 aa2.98□□□□□ -1.93
PTP4A1-207ENST00000639568 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
PTP4A1-207ENST00000639568 SERP2Q8N6R1 65 aa2.85□□□□□ -1.95
PTP4A1-207ENST00000639568 SPANXA2-OT1Q8N9U9 137 aa2.84□□□□□ -1.95
PTP4A1-207ENST00000639568 V9GYY9 64 aa2.84□□□□□ -1.95
PTP4A1-207ENST00000639568 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
PTP4A1-207ENST00000639568 COA5Q86WW8 74 aa2.81□□□□□ -1.96
PTP4A1-207ENST00000639568 SNURFQ9Y675 71 aa2.8□□□□□ -1.96
PTP4A1-207ENST00000639568 PSPHP1O15172 72 aa2.79□□□□□ -1.96
PTP4A1-207ENST00000639568 SMIM20Q8N5G0 67 aa2.76□□□□□ -1.97
PTP4A1-207ENST00000639568 A0A1B0GU69 56 aa2.73□□□□□ -1.97
PTP4A1-207ENST00000639568 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
PTP4A1-207ENST00000639568 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
PTP4A1-207ENST00000639568 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
PTP4A1-207ENST00000639568 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
PTP4A1-207ENST00000639568 H7BZZ5 65 aa2.65□□□□□ -1.99
PTP4A1-207ENST00000639568 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
PTP4A1-207ENST00000639568 PRR15LQ9BU68 103 aa2.6□□□□□ -1.99
PTP4A1-207ENST00000639568 ANAPC13Q9BS18 74 aa2.59□□□□□ -1.99
PTP4A1-207ENST00000639568 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
PTP4A1-207ENST00000639568 K7ERS5 55 aa2.53□□□□□ -2
PTP4A1-207ENST00000639568 J3QR89 54 aa2.52□□□□□ -2.01
PTP4A1-207ENST00000639568 LOC105371267A0A1B0GV96 52 aa2.45□□□□□ -2.02
PTP4A1-207ENST00000639568 A6NED7 52 aa2.41□□□□□ -2.02
PTP4A1-207ENST00000639568 RPS28P62857 69 aaKnown RBP2.41□□□□□ -2.02
PTP4A1-207ENST00000639568 UQCR11O14957 56 aa2.35□□□□□ -2.03
PTP4A1-207ENST00000639568 A0A1B0GV90 55 aa2.24□□□□□ -2.05
PTP4A1-207ENST00000639568 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
PTP4A1-207ENST00000639568 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
PTP4A1-207ENST00000639568 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
PTP4A1-207ENST00000639568 COX7CP15954 63 aa2.14□□□□□ -2.07
PTP4A1-207ENST00000639568 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
PTP4A1-207ENST00000639568 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
PTP4A1-207ENST00000639568 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
PTP4A1-207ENST00000639568 K7ERU9 68 aa2.08□□□□□ -2.08
PTP4A1-207ENST00000639568 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
PTP4A1-207ENST00000639568 ROMO1P60602 79 aa2.03□□□□□ -2.08
PTP4A1-207ENST00000639568 Q1T7F1 81 aa2.02□□□□□ -2.09
PTP4A1-207ENST00000639568 TMEM258P61165 79 aa2.01□□□□□ -2.09
PTP4A1-207ENST00000639568 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
PTP4A1-207ENST00000639568 ATP5EP56381 51 aaPredicted RBP1.92□□□□□ -2.1
PTP4A1-207ENST00000639568 CCDC179H3BU77 68 aa1.69□□□□□ -2.14
PTP4A1-207ENST00000639568 BRK1Q8WUW1 75 aa1.69□□□□□ -2.14
PTP4A1-207ENST00000639568 INE1O15225 51 aa1.52□□□□□ -2.17
PTP4A1-207ENST00000639568 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
PTP4A1-207ENST00000639568 PRM1P04553 51 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms