RNA–Protein interactions for RNA: ENST00000639498.1

KCNMA1-263, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-263ENST00000639498 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
KCNMA1-263ENST00000639498 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
KCNMA1-263ENST00000639498 MT1MQ8N339 61 aa3.83□□□□□ -1.8
KCNMA1-263ENST00000639498 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
KCNMA1-263ENST00000639498 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
KCNMA1-263ENST00000639498 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
KCNMA1-263ENST00000639498 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
KCNMA1-263ENST00000639498 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
KCNMA1-263ENST00000639498 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
KCNMA1-263ENST00000639498 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
KCNMA1-263ENST00000639498 MUC2Q02817 5179 aa3.65□□□□□ -1.82
KCNMA1-263ENST00000639498 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
KCNMA1-263ENST00000639498 MT3P25713 68 aa3.65□□□□□ -1.83
KCNMA1-263ENST00000639498 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
KCNMA1-263ENST00000639498 MT1AP04731 61 aa3.56□□□□□ -1.84
KCNMA1-263ENST00000639498 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
KCNMA1-263ENST00000639498 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
KCNMA1-263ENST00000639498 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
KCNMA1-263ENST00000639498 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
KCNMA1-263ENST00000639498 MT4P47944 62 aa3.5□□□□□ -1.85
KCNMA1-263ENST00000639498 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
KCNMA1-263ENST00000639498 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
KCNMA1-263ENST00000639498 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
KCNMA1-263ENST00000639498 PRM1P04553 51 aa3.41□□□□□ -1.86
KCNMA1-263ENST00000639498 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
KCNMA1-263ENST00000639498 USH2AO75445 5202 aa3.38□□□□□ -1.87
KCNMA1-263ENST00000639498 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
KCNMA1-263ENST00000639498 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
KCNMA1-263ENST00000639498 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
KCNMA1-263ENST00000639498 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
KCNMA1-263ENST00000639498 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
KCNMA1-263ENST00000639498 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
KCNMA1-263ENST00000639498 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
KCNMA1-263ENST00000639498 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
KCNMA1-263ENST00000639498 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
KCNMA1-263ENST00000639498 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
KCNMA1-263ENST00000639498 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
KCNMA1-263ENST00000639498 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
KCNMA1-263ENST00000639498 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
KCNMA1-263ENST00000639498 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
KCNMA1-263ENST00000639498 KMT2DO14686 5537 aa3.14□□□□□ -1.91
KCNMA1-263ENST00000639498 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
KCNMA1-263ENST00000639498 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
KCNMA1-263ENST00000639498 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
KCNMA1-263ENST00000639498 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
KCNMA1-263ENST00000639498 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
KCNMA1-263ENST00000639498 NEBP20929 6669 aa2.87□□□□□ -1.95
KCNMA1-263ENST00000639498 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
KCNMA1-263ENST00000639498 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
KCNMA1-263ENST00000639498 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
KCNMA1-263ENST00000639498 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
KCNMA1-263ENST00000639498 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
KCNMA1-263ENST00000639498 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
KCNMA1-263ENST00000639498 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
KCNMA1-263ENST00000639498 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
KCNMA1-263ENST00000639498 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
KCNMA1-263ENST00000639498 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
KCNMA1-263ENST00000639498 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
KCNMA1-263ENST00000639498 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
KCNMA1-263ENST00000639498 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
KCNMA1-263ENST00000639498 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
KCNMA1-263ENST00000639498 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
KCNMA1-263ENST00000639498 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
KCNMA1-263ENST00000639498 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
KCNMA1-263ENST00000639498 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.05
KCNMA1-263ENST00000639498 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
KCNMA1-263ENST00000639498 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.06
KCNMA1-263ENST00000639498 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
KCNMA1-263ENST00000639498 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
KCNMA1-263ENST00000639498 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
KCNMA1-263ENST00000639498 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
KCNMA1-263ENST00000639498 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
KCNMA1-263ENST00000639498 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.1
KCNMA1-263ENST00000639498 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
KCNMA1-263ENST00000639498 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
KCNMA1-263ENST00000639498 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
KCNMA1-263ENST00000639498 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
KCNMA1-263ENST00000639498 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 99.2 ms