RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 UQCR11O14957 56 aa5.9□□□□□ -1.46
COLCA2-207ENST00000639470 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
COLCA2-207ENST00000639470 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
COLCA2-207ENST00000639470 PSPHP1O15172 72 aa5.86□□□□□ -1.47
COLCA2-207ENST00000639470 MT1GP13640 62 aa5.84□□□□□ -1.47
COLCA2-207ENST00000639470 LCE3AQ5TA76 89 aa5.84□□□□□ -1.47
COLCA2-207ENST00000639470 MT1MQ8N339 61 aa5.84□□□□□ -1.47
COLCA2-207ENST00000639470 MT1LQ93083 61 aa5.84□□□□□ -1.47
COLCA2-207ENST00000639470 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
COLCA2-207ENST00000639470 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
COLCA2-207ENST00000639470 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
COLCA2-207ENST00000639470 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
COLCA2-207ENST00000639470 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
COLCA2-207ENST00000639470 MT4P47944 62 aa5.73□□□□□ -1.49
COLCA2-207ENST00000639470 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
COLCA2-207ENST00000639470 A6NED7 52 aa5.7□□□□□ -1.5
COLCA2-207ENST00000639470 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
COLCA2-207ENST00000639470 TNP1P09430 55 aa5.69□□□□□ -1.5
COLCA2-207ENST00000639470 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
COLCA2-207ENST00000639470 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
COLCA2-207ENST00000639470 K7ERS5 55 aa5.63□□□□□ -1.51
COLCA2-207ENST00000639470 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
COLCA2-207ENST00000639470 HMCN1Q96RW7 5635 aa5.57□□□□□ -1.52
COLCA2-207ENST00000639470 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
COLCA2-207ENST00000639470 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
COLCA2-207ENST00000639470 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
COLCA2-207ENST00000639470 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
COLCA2-207ENST00000639470 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
COLCA2-207ENST00000639470 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
COLCA2-207ENST00000639470 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
COLCA2-207ENST00000639470 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
COLCA2-207ENST00000639470 ROMO1P60602 79 aa5.31□□□□□ -1.56
COLCA2-207ENST00000639470 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
COLCA2-207ENST00000639470 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
COLCA2-207ENST00000639470 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
COLCA2-207ENST00000639470 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
COLCA2-207ENST00000639470 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
COLCA2-207ENST00000639470 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
COLCA2-207ENST00000639470 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
COLCA2-207ENST00000639470 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
COLCA2-207ENST00000639470 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
COLCA2-207ENST00000639470 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
COLCA2-207ENST00000639470 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
COLCA2-207ENST00000639470 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
COLCA2-207ENST00000639470 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
COLCA2-207ENST00000639470 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
COLCA2-207ENST00000639470 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
COLCA2-207ENST00000639470 MT1AP04731 61 aa4.93□□□□□ -1.62
COLCA2-207ENST00000639470 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
COLCA2-207ENST00000639470 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
COLCA2-207ENST00000639470 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
COLCA2-207ENST00000639470 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
COLCA2-207ENST00000639470 KRTAP5-8O75690 187 aa4.71□□□□□ -1.66
COLCA2-207ENST00000639470 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
COLCA2-207ENST00000639470 MT3P25713 68 aa4.47□□□□□ -1.69
COLCA2-207ENST00000639470 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
COLCA2-207ENST00000639470 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
COLCA2-207ENST00000639470 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
COLCA2-207ENST00000639470 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
COLCA2-207ENST00000639470 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
COLCA2-207ENST00000639470 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
COLCA2-207ENST00000639470 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
COLCA2-207ENST00000639470 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
COLCA2-207ENST00000639470 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
COLCA2-207ENST00000639470 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
COLCA2-207ENST00000639470 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
COLCA2-207ENST00000639470 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
COLCA2-207ENST00000639470 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
COLCA2-207ENST00000639470 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
COLCA2-207ENST00000639470 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
COLCA2-207ENST00000639470 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
COLCA2-207ENST00000639470 INE1O15225 51 aa3.18□□□□□ -1.9
COLCA2-207ENST00000639470 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
COLCA2-207ENST00000639470 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
COLCA2-207ENST00000639470 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
COLCA2-207ENST00000639470 PRM1P04553 51 aa2.73□□□□□ -1.97
COLCA2-207ENST00000639470 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
COLCA2-207ENST00000639470 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 77.2 ms