RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
NECAP1-215ENST00000639071 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
NECAP1-215ENST00000639071 MT1EP04732 61 aa3.19□□□□□ -1.9
NECAP1-215ENST00000639071 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
NECAP1-215ENST00000639071 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
NECAP1-215ENST00000639071 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
NECAP1-215ENST00000639071 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
NECAP1-215ENST00000639071 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
NECAP1-215ENST00000639071 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
NECAP1-215ENST00000639071 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
NECAP1-215ENST00000639071 MT1GP13640 62 aa3.08□□□□□ -1.92
NECAP1-215ENST00000639071 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
NECAP1-215ENST00000639071 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
NECAP1-215ENST00000639071 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.93
NECAP1-215ENST00000639071 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
NECAP1-215ENST00000639071 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
NECAP1-215ENST00000639071 MT1MQ8N339 61 aa2.98□□□□□ -1.93
NECAP1-215ENST00000639071 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
NECAP1-215ENST00000639071 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
NECAP1-215ENST00000639071 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
NECAP1-215ENST00000639071 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
NECAP1-215ENST00000639071 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
NECAP1-215ENST00000639071 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
NECAP1-215ENST00000639071 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
NECAP1-215ENST00000639071 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
NECAP1-215ENST00000639071 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
NECAP1-215ENST00000639071 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
NECAP1-215ENST00000639071 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
NECAP1-215ENST00000639071 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
NECAP1-215ENST00000639071 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
NECAP1-215ENST00000639071 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
NECAP1-215ENST00000639071 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
NECAP1-215ENST00000639071 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
NECAP1-215ENST00000639071 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
NECAP1-215ENST00000639071 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
NECAP1-215ENST00000639071 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
NECAP1-215ENST00000639071 MT1AP04731 61 aa2.66□□□□□ -1.98
NECAP1-215ENST00000639071 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
NECAP1-215ENST00000639071 PRM1P04553 51 aa2.62□□□□□ -1.99
NECAP1-215ENST00000639071 KRTAP6-3Q3LI67 103 aa2.62□□□□□ -1.99
NECAP1-215ENST00000639071 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
NECAP1-215ENST00000639071 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
NECAP1-215ENST00000639071 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
NECAP1-215ENST00000639071 SPRR2EP22531 72 aa2.57□□□□□ -2
NECAP1-215ENST00000639071 SPRR2BP35325 72 aa2.57□□□□□ -2
NECAP1-215ENST00000639071 SPRR2AP35326 72 aa2.57□□□□□ -2
NECAP1-215ENST00000639071 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
NECAP1-215ENST00000639071 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
NECAP1-215ENST00000639071 SPRR2DP22532 72 aa2.48□□□□□ -2.01
NECAP1-215ENST00000639071 NEBP20929 6669 aa2.44□□□□□ -2.02
NECAP1-215ENST00000639071 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
NECAP1-215ENST00000639071 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
NECAP1-215ENST00000639071 MT3P25713 68 aa2.39□□□□□ -2.03
NECAP1-215ENST00000639071 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
NECAP1-215ENST00000639071 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
NECAP1-215ENST00000639071 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.04
NECAP1-215ENST00000639071 MT4P47944 62 aa2.22□□□□□ -2.05
NECAP1-215ENST00000639071 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
NECAP1-215ENST00000639071 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
NECAP1-215ENST00000639071 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
NECAP1-215ENST00000639071 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
NECAP1-215ENST00000639071 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
NECAP1-215ENST00000639071 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
NECAP1-215ENST00000639071 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
NECAP1-215ENST00000639071 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
NECAP1-215ENST00000639071 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
NECAP1-215ENST00000639071 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
NECAP1-215ENST00000639071 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
NECAP1-215ENST00000639071 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
NECAP1-215ENST00000639071 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
NECAP1-215ENST00000639071 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
NECAP1-215ENST00000639071 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
NECAP1-215ENST00000639071 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
NECAP1-215ENST00000639071 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
NECAP1-215ENST00000639071 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
NECAP1-215ENST00000639071 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
NECAP1-215ENST00000639071 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
NECAP1-215ENST00000639071 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 103.7 ms