RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
NECAP1-214ENST00000639038 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
NECAP1-214ENST00000639038 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
NECAP1-214ENST00000639038 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
NECAP1-214ENST00000639038 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
NECAP1-214ENST00000639038 MT1XP80297 61 aa3.24□□□□□ -1.89
NECAP1-214ENST00000639038 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
NECAP1-214ENST00000639038 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
NECAP1-214ENST00000639038 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
NECAP1-214ENST00000639038 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
NECAP1-214ENST00000639038 MT3P25713 68 aa3.17□□□□□ -1.9
NECAP1-214ENST00000639038 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
NECAP1-214ENST00000639038 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
NECAP1-214ENST00000639038 TNP1P09430 55 aa3.11□□□□□ -1.91
NECAP1-214ENST00000639038 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
NECAP1-214ENST00000639038 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
NECAP1-214ENST00000639038 KRTAP10-12P60413 245 aa3.09□□□□□ -1.92
NECAP1-214ENST00000639038 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
NECAP1-214ENST00000639038 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
NECAP1-214ENST00000639038 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
NECAP1-214ENST00000639038 KMT2DO14686 5537 aa2.94□□□□□ -1.94
NECAP1-214ENST00000639038 KRTAP8-1Q8IUC2 63 aa2.94□□□□□ -1.94
NECAP1-214ENST00000639038 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
NECAP1-214ENST00000639038 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.95
NECAP1-214ENST00000639038 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
NECAP1-214ENST00000639038 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
NECAP1-214ENST00000639038 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
NECAP1-214ENST00000639038 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
NECAP1-214ENST00000639038 MT1EP04732 61 aa2.85□□□□□ -1.95
NECAP1-214ENST00000639038 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
NECAP1-214ENST00000639038 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
NECAP1-214ENST00000639038 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
NECAP1-214ENST00000639038 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
NECAP1-214ENST00000639038 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
NECAP1-214ENST00000639038 MT1LQ93083 61 aa2.78□□□□□ -1.97
NECAP1-214ENST00000639038 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
NECAP1-214ENST00000639038 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
NECAP1-214ENST00000639038 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
NECAP1-214ENST00000639038 MT1GP13640 62 aa2.73□□□□□ -1.97
NECAP1-214ENST00000639038 SPRR2EP22531 72 aa2.73□□□□□ -1.97
NECAP1-214ENST00000639038 SPRR2BP35325 72 aa2.73□□□□□ -1.97
NECAP1-214ENST00000639038 SPRR2AP35326 72 aa2.73□□□□□ -1.97
NECAP1-214ENST00000639038 NEBP20929 6669 aa2.71□□□□□ -1.98
NECAP1-214ENST00000639038 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
NECAP1-214ENST00000639038 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
NECAP1-214ENST00000639038 MT1MQ8N339 61 aa2.69□□□□□ -1.98
NECAP1-214ENST00000639038 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
NECAP1-214ENST00000639038 SPRR2DP22532 72 aa2.64□□□□□ -1.99
NECAP1-214ENST00000639038 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
NECAP1-214ENST00000639038 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
NECAP1-214ENST00000639038 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
NECAP1-214ENST00000639038 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
NECAP1-214ENST00000639038 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
NECAP1-214ENST00000639038 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
NECAP1-214ENST00000639038 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
NECAP1-214ENST00000639038 PRM1P04553 51 aa2.46□□□□□ -2.02
NECAP1-214ENST00000639038 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
NECAP1-214ENST00000639038 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
NECAP1-214ENST00000639038 MT1AP04731 61 aa2.37□□□□□ -2.03
NECAP1-214ENST00000639038 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
NECAP1-214ENST00000639038 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
NECAP1-214ENST00000639038 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
NECAP1-214ENST00000639038 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
NECAP1-214ENST00000639038 MT4P47944 62 aa2.27□□□□□ -2.05
NECAP1-214ENST00000639038 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
NECAP1-214ENST00000639038 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
NECAP1-214ENST00000639038 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
NECAP1-214ENST00000639038 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
NECAP1-214ENST00000639038 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
NECAP1-214ENST00000639038 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
NECAP1-214ENST00000639038 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
NECAP1-214ENST00000639038 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
NECAP1-214ENST00000639038 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
NECAP1-214ENST00000639038 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
NECAP1-214ENST00000639038 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
NECAP1-214ENST00000639038 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
NECAP1-214ENST00000639038 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
NECAP1-214ENST00000639038 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 104.3 ms