RNA–Protein interactions for RNA: ENST00000639034.1

PAX6-249, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-249ENST00000639034 NEBP20929 6669 aa4.83□□□□□ -1.64
PAX6-249ENST00000639034 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
PAX6-249ENST00000639034 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
PAX6-249ENST00000639034 H3BS24 57 aa4.81□□□□□ -1.64
PAX6-249ENST00000639034 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
PAX6-249ENST00000639034 SPRR2EP22531 72 aa4.76□□□□□ -1.65
PAX6-249ENST00000639034 SPRR2BP35325 72 aa4.76□□□□□ -1.65
PAX6-249ENST00000639034 SPRR2AP35326 72 aa4.76□□□□□ -1.65
PAX6-249ENST00000639034 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
PAX6-249ENST00000639034 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
PAX6-249ENST00000639034 TNP1P09430 55 aa4.7□□□□□ -1.66
PAX6-249ENST00000639034 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
PAX6-249ENST00000639034 ROMO1P60602 79 aa4.65□□□□□ -1.67
PAX6-249ENST00000639034 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
PAX6-249ENST00000639034 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
PAX6-249ENST00000639034 SPRR2DP22532 72 aa4.61□□□□□ -1.67
PAX6-249ENST00000639034 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
PAX6-249ENST00000639034 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
PAX6-249ENST00000639034 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
PAX6-249ENST00000639034 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
PAX6-249ENST00000639034 MT1EP04732 61 aa4.52□□□□□ -1.69
PAX6-249ENST00000639034 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
PAX6-249ENST00000639034 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
PAX6-249ENST00000639034 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
PAX6-249ENST00000639034 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
PAX6-249ENST00000639034 MT1GP13640 62 aa4.37□□□□□ -1.71
PAX6-249ENST00000639034 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
PAX6-249ENST00000639034 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
PAX6-249ENST00000639034 MT1LQ93083 61 aa4.33□□□□□ -1.72
PAX6-249ENST00000639034 MT1MQ8N339 61 aa4.29□□□□□ -1.72
PAX6-249ENST00000639034 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
PAX6-249ENST00000639034 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
PAX6-249ENST00000639034 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
PAX6-249ENST00000639034 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
PAX6-249ENST00000639034 MT4P47944 62 aa4.01□□□□□ -1.77
PAX6-249ENST00000639034 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
PAX6-249ENST00000639034 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
PAX6-249ENST00000639034 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
PAX6-249ENST00000639034 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
PAX6-249ENST00000639034 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
PAX6-249ENST00000639034 A0A0A0MQY5 61 aa3.9□□□□□ -1.78
PAX6-249ENST00000639034 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
PAX6-249ENST00000639034 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
PAX6-249ENST00000639034 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
PAX6-249ENST00000639034 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
PAX6-249ENST00000639034 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
PAX6-249ENST00000639034 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
PAX6-249ENST00000639034 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.81
PAX6-249ENST00000639034 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
PAX6-249ENST00000639034 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
PAX6-249ENST00000639034 MT1AP04731 61 aa3.69□□□□□ -1.82
PAX6-249ENST00000639034 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
PAX6-249ENST00000639034 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
PAX6-249ENST00000639034 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
PAX6-249ENST00000639034 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
PAX6-249ENST00000639034 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
PAX6-249ENST00000639034 MT3P25713 68 aa3.39□□□□□ -1.87
PAX6-249ENST00000639034 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
PAX6-249ENST00000639034 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
PAX6-249ENST00000639034 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
PAX6-249ENST00000639034 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PAX6-249ENST00000639034 INE1O15225 51 aa3.27□□□□□ -1.89
PAX6-249ENST00000639034 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
PAX6-249ENST00000639034 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
PAX6-249ENST00000639034 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
PAX6-249ENST00000639034 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
PAX6-249ENST00000639034 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
PAX6-249ENST00000639034 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
PAX6-249ENST00000639034 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
PAX6-249ENST00000639034 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
PAX6-249ENST00000639034 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PAX6-249ENST00000639034 PRM1P04553 51 aa2.43□□□□□ -2.02
PAX6-249ENST00000639034 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.02
PAX6-249ENST00000639034 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
PAX6-249ENST00000639034 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
PAX6-249ENST00000639034 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
PAX6-249ENST00000639034 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 87 ms