RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 RPS29P62273 56 aaKnown RBP1.78□□□□□ -2.12
FAM49B-230ENST00000639004 TP53AIP1Q9HCN2 124 aa1.78□□□□□ -2.12
FAM49B-230ENST00000639004 FLG2Q5D862 2391 aaPredicted RBP1.78□□□□□ -2.12
FAM49B-230ENST00000639004 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
FAM49B-230ENST00000639004 HERC1Q15751 4861 aa1.76□□□□□ -2.13
FAM49B-230ENST00000639004 LPAP08519 4548 aa1.76□□□□□ -2.13
FAM49B-230ENST00000639004 LRP2P98164 4655 aa1.75□□□□□ -2.13
FAM49B-230ENST00000639004 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
FAM49B-230ENST00000639004 DMBT1Q9UGM3 2413 aaPredicted RBP1.72□□□□□ -2.13
FAM49B-230ENST00000639004 CRIPTQ9P021 101 aa1.7□□□□□ -2.14
FAM49B-230ENST00000639004 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
FAM49B-230ENST00000639004 RNF213Q63HN8 5207 aa1.69□□□□□ -2.14
FAM49B-230ENST00000639004 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
FAM49B-230ENST00000639004 UBR4Q5T4S7 5183 aa1.65□□□□□ -2.14
FAM49B-230ENST00000639004 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
FAM49B-230ENST00000639004 MUC2Q02817 5179 aa1.64□□□□□ -2.15
FAM49B-230ENST00000639004 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
FAM49B-230ENST00000639004 H1FX-AS1Q4G0G2 97 aa1.6□□□□□ -2.15
FAM49B-230ENST00000639004 S4R3F8 94 aa1.6□□□□□ -2.15
FAM49B-230ENST00000639004 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
FAM49B-230ENST00000639004 H0YAA0 97 aa1.58□□□□□ -2.16
FAM49B-230ENST00000639004 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
FAM49B-230ENST00000639004 A0A0D9SG42 100 aa1.52□□□□□ -2.17
FAM49B-230ENST00000639004 MT1HP80294 61 aa1.51□□□□□ -2.17
FAM49B-230ENST00000639004 M0QZ58 72 aa1.48□□□□□ -2.17
FAM49B-230ENST00000639004 MT2AP02795 61 aa1.47□□□□□ -2.17
FAM49B-230ENST00000639004 MT1FP04733 61 aa1.47□□□□□ -2.17
FAM49B-230ENST00000639004 USH2AO75445 5202 aa1.43□□□□□ -2.18
FAM49B-230ENST00000639004 M0R2T5 61 aa1.43□□□□□ -2.18
FAM49B-230ENST00000639004 SPRR2GQ9BYE4 73 aa1.42□□□□□ -2.18
FAM49B-230ENST00000639004 MT1BP07438 61 aa1.4□□□□□ -2.19
FAM49B-230ENST00000639004 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
FAM49B-230ENST00000639004 SSPOA2VEC9 5147 aa1.38□□□□□ -2.19
FAM49B-230ENST00000639004 MT1XP80297 61 aa1.36□□□□□ -2.19
FAM49B-230ENST00000639004 TNP1P09430 55 aa1.3□□□□□ -2.2
FAM49B-230ENST00000639004 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
FAM49B-230ENST00000639004 KMT2DO14686 5537 aa1.29□□□□□ -2.2
FAM49B-230ENST00000639004 KRTAP8-1Q8IUC2 63 aa1.26□□□□□ -2.21
FAM49B-230ENST00000639004 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
FAM49B-230ENST00000639004 KRTAP19-5Q3LI72 72 aa1.24□□□□□ -2.21
FAM49B-230ENST00000639004 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
FAM49B-230ENST00000639004 MUC12Q9UKN1 5478 aa1.2□□□□□ -2.22
FAM49B-230ENST00000639004 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
FAM49B-230ENST00000639004 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
FAM49B-230ENST00000639004 MACF1Q9UPN3 7388 aaKnown RBP1.19□□□□□ -2.22
FAM49B-230ENST00000639004 MT1EP04732 61 aa1.18□□□□□ -2.22
FAM49B-230ENST00000639004 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
FAM49B-230ENST00000639004 MT1LQ93083 61 aa1.16□□□□□ -2.22
FAM49B-230ENST00000639004 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
FAM49B-230ENST00000639004 MT1MQ8N339 61 aa1.11□□□□□ -2.23
FAM49B-230ENST00000639004 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
FAM49B-230ENST00000639004 NEBP20929 6669 aa1.1□□□□□ -2.23
FAM49B-230ENST00000639004 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
FAM49B-230ENST00000639004 MT1GP13640 62 aa1.08□□□□□ -2.24
FAM49B-230ENST00000639004 KRTAP2-3P0C7H8 128 aa1.05□□□□□ -2.24
FAM49B-230ENST00000639004 KRTAP2-4Q9BYR9 128 aa1.05□□□□□ -2.24
FAM49B-230ENST00000639004 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
FAM49B-230ENST00000639004 DSTQ03001 7570 aaKnown RBP1.03□□□□□ -2.24
FAM49B-230ENST00000639004 SPRR2EP22531 72 aa1.03□□□□□ -2.24
FAM49B-230ENST00000639004 SPRR2BP35325 72 aa1.03□□□□□ -2.24
FAM49B-230ENST00000639004 SPRR2AP35326 72 aa1.03□□□□□ -2.24
FAM49B-230ENST00000639004 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
FAM49B-230ENST00000639004 SPRR2DP22532 72 aa1□□□□□ -2.25
FAM49B-230ENST00000639004 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
FAM49B-230ENST00000639004 SYNE1Q8NF91 8797 aaKnown RBP0.98□□□□□ -2.25
FAM49B-230ENST00000639004 GPR98Q8WXG9 6306 aa0.97□□□□□ -2.25
FAM49B-230ENST00000639004 MT1AP04731 61 aa0.97□□□□□ -2.25
FAM49B-230ENST00000639004 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
FAM49B-230ENST00000639004 MT4P47944 62 aa0.88□□□□□ -2.27
FAM49B-230ENST00000639004 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
FAM49B-230ENST00000639004 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
FAM49B-230ENST00000639004 PRM1P04553 51 aa0.85□□□□□ -2.27
FAM49B-230ENST00000639004 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
FAM49B-230ENST00000639004 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
FAM49B-230ENST00000639004 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
FAM49B-230ENST00000639004 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
FAM49B-230ENST00000639004 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms