RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TNP1P09430 55 aa8.02□□□□□ -1.13
SCN1B-206ENST00000638536 LCE3AQ5TA76 89 aa7.99□□□□□ -1.13
SCN1B-206ENST00000638536 LCE5AQ5TCM9 118 aa7.96□□□□□ -1.14
SCN1B-206ENST00000638536 KRTAP2-2Q9BYT5 123 aa7.96□□□□□ -1.14
SCN1B-206ENST00000638536 KRTAP2-1Q9BYU5 128 aa7.96□□□□□ -1.14
SCN1B-206ENST00000638536 KRTAP19-3Q7Z4W3 81 aa7.95□□□□□ -1.14
SCN1B-206ENST00000638536 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
SCN1B-206ENST00000638536 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
SCN1B-206ENST00000638536 DSTQ03001 7570 aaKnown RBP7.9□□□□□ -1.14
SCN1B-206ENST00000638536 MT1GP13640 62 aa7.78□□□□□ -1.16
SCN1B-206ENST00000638536 MT1LQ93083 61 aa7.78□□□□□ -1.16
SCN1B-206ENST00000638536 ROMO1P60602 79 aa7.74□□□□□ -1.17
SCN1B-206ENST00000638536 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
SCN1B-206ENST00000638536 MT1MQ8N339 61 aa7.69□□□□□ -1.18
SCN1B-206ENST00000638536 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
SCN1B-206ENST00000638536 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
SCN1B-206ENST00000638536 KRTAP4-3Q9BYR4 195 aa7.59□□□□□ -1.19
SCN1B-206ENST00000638536 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
SCN1B-206ENST00000638536 KRTAP4-9Q9BYQ8 210 aa7.39□□□□□ -1.23
SCN1B-206ENST00000638536 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
SCN1B-206ENST00000638536 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
SCN1B-206ENST00000638536 LCE1DQ5T752 114 aa7.21□□□□□ -1.26
SCN1B-206ENST00000638536 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
SCN1B-206ENST00000638536 KRTAP5-4Q6L8H1 288 aa7.18□□□□□ -1.26
SCN1B-206ENST00000638536 MT4P47944 62 aa7.17□□□□□ -1.26
SCN1B-206ENST00000638536 HMCN1Q96RW7 5635 aa7.16□□□□□ -1.26
SCN1B-206ENST00000638536 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
SCN1B-206ENST00000638536 KRTAP19-4Q3LI73 84 aa7.09□□□□□ -1.28
SCN1B-206ENST00000638536 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
SCN1B-206ENST00000638536 KRTAP5-5Q701N2 237 aaPredicted RBP7.04□□□□□ -1.28
SCN1B-206ENST00000638536 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
SCN1B-206ENST00000638536 GPR98Q8WXG9 6306 aa6.92□□□□□ -1.3
SCN1B-206ENST00000638536 SYNE1Q8NF91 8797 aaKnown RBP6.84□□□□□ -1.31
SCN1B-206ENST00000638536 AHNAK2Q8IVF2 5795 aa6.81□□□□□ -1.32
SCN1B-206ENST00000638536 KRTAP9-6A8MVA2 160 aa6.76□□□□□ -1.33
SCN1B-206ENST00000638536 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
SCN1B-206ENST00000638536 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
SCN1B-206ENST00000638536 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
SCN1B-206ENST00000638536 H3BS24 57 aa6.62□□□□□ -1.35
SCN1B-206ENST00000638536 NDUFAF8A1L188 74 aa6.61□□□□□ -1.35
SCN1B-206ENST00000638536 KRTAP6-1Q3LI64 71 aa6.6□□□□□ -1.35
SCN1B-206ENST00000638536 MT1AP04731 61 aa6.59□□□□□ -1.35
SCN1B-206ENST00000638536 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
SCN1B-206ENST00000638536 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
SCN1B-206ENST00000638536 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
SCN1B-206ENST00000638536 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
SCN1B-206ENST00000638536 KRTAP5-2Q701N4 177 aa6.33□□□□□ -1.4
SCN1B-206ENST00000638536 KRTAP6-2Q3LI66 62 aa6.24□□□□□ -1.41
SCN1B-206ENST00000638536 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
SCN1B-206ENST00000638536 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
SCN1B-206ENST00000638536 OBSCNQ5VST9 7968 aa6.09□□□□□ -1.44
SCN1B-206ENST00000638536 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
SCN1B-206ENST00000638536 MT3P25713 68 aa5.99□□□□□ -1.45
SCN1B-206ENST00000638536 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
SCN1B-206ENST00000638536 KRTAP5-1Q6L8H4 278 aa5.66□□□□□ -1.5
SCN1B-206ENST00000638536 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
SCN1B-206ENST00000638536 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
SCN1B-206ENST00000638536 INE1O15225 51 aa5.56□□□□□ -1.52
SCN1B-206ENST00000638536 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
SCN1B-206ENST00000638536 AHNAKQ09666 5890 aaKnown RBP5.48□□□□□ -1.53
SCN1B-206ENST00000638536 LCE1EQ5T753 118 aa5.43□□□□□ -1.54
SCN1B-206ENST00000638536 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
SCN1B-206ENST00000638536 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.58
SCN1B-206ENST00000638536 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
SCN1B-206ENST00000638536 LCE1CQ5T751 118 aa5.06□□□□□ -1.6
SCN1B-206ENST00000638536 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
SCN1B-206ENST00000638536 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
SCN1B-206ENST00000638536 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
SCN1B-206ENST00000638536 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
SCN1B-206ENST00000638536 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
SCN1B-206ENST00000638536 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
SCN1B-206ENST00000638536 PRM1P04553 51 aa4.04□□□□□ -1.76
SCN1B-206ENST00000638536 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
SCN1B-206ENST00000638536 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
SCN1B-206ENST00000638536 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
SCN1B-206ENST00000638536 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
SCN1B-206ENST00000638536 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms