RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
TARDBP-229ENST00000638264 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
TARDBP-229ENST00000638264 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
TARDBP-229ENST00000638264 KMT2DO14686 5537 aa4.41□□□□□ -1.7
TARDBP-229ENST00000638264 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
TARDBP-229ENST00000638264 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
TARDBP-229ENST00000638264 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
TARDBP-229ENST00000638264 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
TARDBP-229ENST00000638264 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
TARDBP-229ENST00000638264 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
TARDBP-229ENST00000638264 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
TARDBP-229ENST00000638264 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
TARDBP-229ENST00000638264 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
TARDBP-229ENST00000638264 MT1EP04732 61 aa4.28□□□□□ -1.72
TARDBP-229ENST00000638264 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
TARDBP-229ENST00000638264 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
TARDBP-229ENST00000638264 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
TARDBP-229ENST00000638264 SPRR2EP22531 72 aa4.22□□□□□ -1.73
TARDBP-229ENST00000638264 SPRR2BP35325 72 aa4.22□□□□□ -1.73
TARDBP-229ENST00000638264 SPRR2AP35326 72 aa4.22□□□□□ -1.73
TARDBP-229ENST00000638264 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
TARDBP-229ENST00000638264 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
TARDBP-229ENST00000638264 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
TARDBP-229ENST00000638264 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
TARDBP-229ENST00000638264 MT1GP13640 62 aa4.16□□□□□ -1.74
TARDBP-229ENST00000638264 MT1LQ93083 61 aa4.16□□□□□ -1.74
TARDBP-229ENST00000638264 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
TARDBP-229ENST00000638264 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
TARDBP-229ENST00000638264 SPRR2DP22532 72 aa4.09□□□□□ -1.75
TARDBP-229ENST00000638264 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
TARDBP-229ENST00000638264 MT1MQ8N339 61 aa4.04□□□□□ -1.76
TARDBP-229ENST00000638264 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
TARDBP-229ENST00000638264 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
TARDBP-229ENST00000638264 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
TARDBP-229ENST00000638264 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
TARDBP-229ENST00000638264 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
TARDBP-229ENST00000638264 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
TARDBP-229ENST00000638264 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
TARDBP-229ENST00000638264 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
TARDBP-229ENST00000638264 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
TARDBP-229ENST00000638264 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
TARDBP-229ENST00000638264 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
TARDBP-229ENST00000638264 MT1AP04731 61 aa3.57□□□□□ -1.84
TARDBP-229ENST00000638264 MT4P47944 62 aa3.57□□□□□ -1.84
TARDBP-229ENST00000638264 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
TARDBP-229ENST00000638264 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
TARDBP-229ENST00000638264 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
TARDBP-229ENST00000638264 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
TARDBP-229ENST00000638264 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
TARDBP-229ENST00000638264 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
TARDBP-229ENST00000638264 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
TARDBP-229ENST00000638264 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
TARDBP-229ENST00000638264 MT3P25713 68 aa3.27□□□□□ -1.89
TARDBP-229ENST00000638264 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
TARDBP-229ENST00000638264 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
TARDBP-229ENST00000638264 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
TARDBP-229ENST00000638264 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
TARDBP-229ENST00000638264 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
TARDBP-229ENST00000638264 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
TARDBP-229ENST00000638264 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
TARDBP-229ENST00000638264 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
TARDBP-229ENST00000638264 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
TARDBP-229ENST00000638264 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
TARDBP-229ENST00000638264 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TARDBP-229ENST00000638264 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
TARDBP-229ENST00000638264 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
TARDBP-229ENST00000638264 INE1O15225 51 aa2.81□□□□□ -1.96
TARDBP-229ENST00000638264 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
TARDBP-229ENST00000638264 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
TARDBP-229ENST00000638264 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
TARDBP-229ENST00000638264 PRM1P04553 51 aa2.37□□□□□ -2.03
TARDBP-229ENST00000638264 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
TARDBP-229ENST00000638264 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
TARDBP-229ENST00000638264 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
TARDBP-229ENST00000638264 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
TARDBP-229ENST00000638264 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
TARDBP-229ENST00000638264 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 387.7 ms