RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
NECAP1-210ENST00000638237 MT1XP80297 61 aa3.47□□□□□ -1.85
NECAP1-210ENST00000638237 KMT2DO14686 5537 aa3.47□□□□□ -1.85
NECAP1-210ENST00000638237 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.85
NECAP1-210ENST00000638237 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
NECAP1-210ENST00000638237 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.86
NECAP1-210ENST00000638237 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
NECAP1-210ENST00000638237 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
NECAP1-210ENST00000638237 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
NECAP1-210ENST00000638237 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
NECAP1-210ENST00000638237 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
NECAP1-210ENST00000638237 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
NECAP1-210ENST00000638237 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
NECAP1-210ENST00000638237 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
NECAP1-210ENST00000638237 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
NECAP1-210ENST00000638237 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
NECAP1-210ENST00000638237 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
NECAP1-210ENST00000638237 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
NECAP1-210ENST00000638237 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
NECAP1-210ENST00000638237 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
NECAP1-210ENST00000638237 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
NECAP1-210ENST00000638237 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
NECAP1-210ENST00000638237 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
NECAP1-210ENST00000638237 MT1EP04732 61 aa3□□□□□ -1.93
NECAP1-210ENST00000638237 MT1LQ93083 61 aa2.98□□□□□ -1.93
NECAP1-210ENST00000638237 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
NECAP1-210ENST00000638237 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
NECAP1-210ENST00000638237 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.93
NECAP1-210ENST00000638237 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
NECAP1-210ENST00000638237 CRCT1Q9UGL9 99 aa2.94□□□□□ -1.94
NECAP1-210ENST00000638237 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
NECAP1-210ENST00000638237 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
NECAP1-210ENST00000638237 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
NECAP1-210ENST00000638237 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
NECAP1-210ENST00000638237 MT1GP13640 62 aa2.83□□□□□ -1.96
NECAP1-210ENST00000638237 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
NECAP1-210ENST00000638237 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
NECAP1-210ENST00000638237 MT1MQ8N339 61 aa2.81□□□□□ -1.96
NECAP1-210ENST00000638237 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
NECAP1-210ENST00000638237 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
NECAP1-210ENST00000638237 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
NECAP1-210ENST00000638237 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
NECAP1-210ENST00000638237 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
NECAP1-210ENST00000638237 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
NECAP1-210ENST00000638237 MT3P25713 68 aa2.64□□□□□ -1.99
NECAP1-210ENST00000638237 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
NECAP1-210ENST00000638237 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
NECAP1-210ENST00000638237 NEBP20929 6669 aa2.58□□□□□ -2
NECAP1-210ENST00000638237 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
NECAP1-210ENST00000638237 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
NECAP1-210ENST00000638237 SPRR2EP22531 72 aa2.56□□□□□ -2
NECAP1-210ENST00000638237 SPRR2BP35325 72 aa2.56□□□□□ -2
NECAP1-210ENST00000638237 SPRR2AP35326 72 aa2.56□□□□□ -2
NECAP1-210ENST00000638237 MT1AP04731 61 aa2.54□□□□□ -2
NECAP1-210ENST00000638237 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
NECAP1-210ENST00000638237 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
NECAP1-210ENST00000638237 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
NECAP1-210ENST00000638237 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.01
NECAP1-210ENST00000638237 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
NECAP1-210ENST00000638237 SPRR2DP22532 72 aa2.44□□□□□ -2.02
NECAP1-210ENST00000638237 PRM1P04553 51 aa2.39□□□□□ -2.03
NECAP1-210ENST00000638237 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
NECAP1-210ENST00000638237 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
NECAP1-210ENST00000638237 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
NECAP1-210ENST00000638237 MT4P47944 62 aa2.21□□□□□ -2.06
NECAP1-210ENST00000638237 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
NECAP1-210ENST00000638237 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
NECAP1-210ENST00000638237 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
NECAP1-210ENST00000638237 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
NECAP1-210ENST00000638237 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
NECAP1-210ENST00000638237 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
NECAP1-210ENST00000638237 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
NECAP1-210ENST00000638237 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
NECAP1-210ENST00000638237 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
NECAP1-210ENST00000638237 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
NECAP1-210ENST00000638237 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
NECAP1-210ENST00000638237 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 129.7 ms