RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
SMARCA2-265ENST00000638139 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
SMARCA2-265ENST00000638139 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
SMARCA2-265ENST00000638139 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
SMARCA2-265ENST00000638139 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
SMARCA2-265ENST00000638139 MT1GP13640 62 aa3.24□□□□□ -1.89
SMARCA2-265ENST00000638139 MT1MQ8N339 61 aa3.22□□□□□ -1.89
SMARCA2-265ENST00000638139 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
SMARCA2-265ENST00000638139 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
SMARCA2-265ENST00000638139 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
SMARCA2-265ENST00000638139 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
SMARCA2-265ENST00000638139 CRCT1Q9UGL9 99 aa3.16□□□□□ -1.9
SMARCA2-265ENST00000638139 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
SMARCA2-265ENST00000638139 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
SMARCA2-265ENST00000638139 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
SMARCA2-265ENST00000638139 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
SMARCA2-265ENST00000638139 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
SMARCA2-265ENST00000638139 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
SMARCA2-265ENST00000638139 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
SMARCA2-265ENST00000638139 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
SMARCA2-265ENST00000638139 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
SMARCA2-265ENST00000638139 MT1AP04731 61 aa2.94□□□□□ -1.94
SMARCA2-265ENST00000638139 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
SMARCA2-265ENST00000638139 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
SMARCA2-265ENST00000638139 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
SMARCA2-265ENST00000638139 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
SMARCA2-265ENST00000638139 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.96
SMARCA2-265ENST00000638139 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SMARCA2-265ENST00000638139 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
SMARCA2-265ENST00000638139 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
SMARCA2-265ENST00000638139 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
SMARCA2-265ENST00000638139 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
SMARCA2-265ENST00000638139 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
SMARCA2-265ENST00000638139 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
SMARCA2-265ENST00000638139 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
SMARCA2-265ENST00000638139 PRM1P04553 51 aa2.75□□□□□ -1.97
SMARCA2-265ENST00000638139 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
SMARCA2-265ENST00000638139 SPRR2EP22531 72 aa2.73□□□□□ -1.97
SMARCA2-265ENST00000638139 SPRR2BP35325 72 aa2.73□□□□□ -1.97
SMARCA2-265ENST00000638139 SPRR2AP35326 72 aa2.73□□□□□ -1.97
SMARCA2-265ENST00000638139 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
SMARCA2-265ENST00000638139 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
SMARCA2-265ENST00000638139 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
SMARCA2-265ENST00000638139 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
SMARCA2-265ENST00000638139 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
SMARCA2-265ENST00000638139 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
SMARCA2-265ENST00000638139 SPRR2DP22532 72 aa2.61□□□□□ -1.99
SMARCA2-265ENST00000638139 MT3P25713 68 aa2.59□□□□□ -2
SMARCA2-265ENST00000638139 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
SMARCA2-265ENST00000638139 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
SMARCA2-265ENST00000638139 NEBP20929 6669 aa2.5□□□□□ -2.01
SMARCA2-265ENST00000638139 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
SMARCA2-265ENST00000638139 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
SMARCA2-265ENST00000638139 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
SMARCA2-265ENST00000638139 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
SMARCA2-265ENST00000638139 MT4P47944 62 aa2.31□□□□□ -2.04
SMARCA2-265ENST00000638139 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
SMARCA2-265ENST00000638139 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
SMARCA2-265ENST00000638139 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
SMARCA2-265ENST00000638139 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
SMARCA2-265ENST00000638139 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.08
SMARCA2-265ENST00000638139 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
SMARCA2-265ENST00000638139 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
SMARCA2-265ENST00000638139 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
SMARCA2-265ENST00000638139 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
SMARCA2-265ENST00000638139 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
SMARCA2-265ENST00000638139 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
SMARCA2-265ENST00000638139 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
SMARCA2-265ENST00000638139 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SMARCA2-265ENST00000638139 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
SMARCA2-265ENST00000638139 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
SMARCA2-265ENST00000638139 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
SMARCA2-265ENST00000638139 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
SMARCA2-265ENST00000638139 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
SMARCA2-265ENST00000638139 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
SMARCA2-265ENST00000638139 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
SMARCA2-265ENST00000638139 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SMARCA2-265ENST00000638139 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 69.6 ms