RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-238ENST00000637903 TNP1P09430 55 aa3.2□□□□□ -1.9
SPTAN1-238ENST00000637903 ROMO1P60602 79 aa3.15□□□□□ -1.91
SPTAN1-238ENST00000637903 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
SPTAN1-238ENST00000637903 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
SPTAN1-238ENST00000637903 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
SPTAN1-238ENST00000637903 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
SPTAN1-238ENST00000637903 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
SPTAN1-238ENST00000637903 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
SPTAN1-238ENST00000637903 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
SPTAN1-238ENST00000637903 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
SPTAN1-238ENST00000637903 MT1EP04732 61 aa3.08□□□□□ -1.92
SPTAN1-238ENST00000637903 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
SPTAN1-238ENST00000637903 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
SPTAN1-238ENST00000637903 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
SPTAN1-238ENST00000637903 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
SPTAN1-238ENST00000637903 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
SPTAN1-238ENST00000637903 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
SPTAN1-238ENST00000637903 MT1GP13640 62 aa3□□□□□ -1.93
SPTAN1-238ENST00000637903 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
SPTAN1-238ENST00000637903 MT4P47944 62 aa2.97□□□□□ -1.93
SPTAN1-238ENST00000637903 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
SPTAN1-238ENST00000637903 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
SPTAN1-238ENST00000637903 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
SPTAN1-238ENST00000637903 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
SPTAN1-238ENST00000637903 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
SPTAN1-238ENST00000637903 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SPTAN1-238ENST00000637903 MT1MQ8N339 61 aa2.94□□□□□ -1.94
SPTAN1-238ENST00000637903 MT1LQ93083 61 aa2.91□□□□□ -1.94
SPTAN1-238ENST00000637903 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
SPTAN1-238ENST00000637903 PRAC1Q96KF2 57 aa2.89□□□□□ -1.95
SPTAN1-238ENST00000637903 KRTAP15-1Q3LI76 137 aa2.87□□□□□ -1.95
SPTAN1-238ENST00000637903 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
SPTAN1-238ENST00000637903 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
SPTAN1-238ENST00000637903 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
SPTAN1-238ENST00000637903 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
SPTAN1-238ENST00000637903 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
SPTAN1-238ENST00000637903 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
SPTAN1-238ENST00000637903 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
SPTAN1-238ENST00000637903 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
SPTAN1-238ENST00000637903 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
SPTAN1-238ENST00000637903 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
SPTAN1-238ENST00000637903 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
SPTAN1-238ENST00000637903 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SPTAN1-238ENST00000637903 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
SPTAN1-238ENST00000637903 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
SPTAN1-238ENST00000637903 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
SPTAN1-238ENST00000637903 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
SPTAN1-238ENST00000637903 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
SPTAN1-238ENST00000637903 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SPTAN1-238ENST00000637903 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
SPTAN1-238ENST00000637903 MT1AP04731 61 aa2.48□□□□□ -2.01
SPTAN1-238ENST00000637903 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
SPTAN1-238ENST00000637903 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
SPTAN1-238ENST00000637903 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
SPTAN1-238ENST00000637903 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
SPTAN1-238ENST00000637903 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
SPTAN1-238ENST00000637903 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-238ENST00000637903 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SPTAN1-238ENST00000637903 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
SPTAN1-238ENST00000637903 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
SPTAN1-238ENST00000637903 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
SPTAN1-238ENST00000637903 MT3P25713 68 aa2.27□□□□□ -2.05
SPTAN1-238ENST00000637903 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
SPTAN1-238ENST00000637903 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
SPTAN1-238ENST00000637903 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
SPTAN1-238ENST00000637903 LCE1CQ5T751 118 aa2□□□□□ -2.09
SPTAN1-238ENST00000637903 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
SPTAN1-238ENST00000637903 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
SPTAN1-238ENST00000637903 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
SPTAN1-238ENST00000637903 INE1O15225 51 aa1.81□□□□□ -2.12
SPTAN1-238ENST00000637903 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
SPTAN1-238ENST00000637903 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SPTAN1-238ENST00000637903 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
SPTAN1-238ENST00000637903 PRM1P04553 51 aa1.63□□□□□ -2.15
SPTAN1-238ENST00000637903 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
SPTAN1-238ENST00000637903 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
SPTAN1-238ENST00000637903 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SPTAN1-238ENST00000637903 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 98.5 ms