RNA–Protein interactions for RNA: ENST00000637266.2

SCN2A-215, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-215ENST00000637266 LCE4AQ5TA78 99 aa2.01□□□□□ -2.09
SCN2A-215ENST00000637266 KRTAP4-8A0A0G2JLE6 195 aa2□□□□□ -2.09
SCN2A-215ENST00000637266 KRTAP4-8Q9BYQ9 185 aa2□□□□□ -2.09
SCN2A-215ENST00000637266 TNXBP22105 4242 aa1.99□□□□□ -2.09
SCN2A-215ENST00000637266 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
SCN2A-215ENST00000637266 HMCN2Q8NDA2 5059 aa1.97□□□□□ -2.09
SCN2A-215ENST00000637266 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
SCN2A-215ENST00000637266 KRTAP9-4Q9BYQ2 154 aa1.91□□□□□ -2.1
SCN2A-215ENST00000637266 LCE2AQ5TA79 106 aaPredicted RBP1.9□□□□□ -2.1
SCN2A-215ENST00000637266 LCE5AQ5TCM9 118 aa1.89□□□□□ -2.11
SCN2A-215ENST00000637266 ABCA13Q86UQ4 5058 aa1.88□□□□□ -2.11
SCN2A-215ENST00000637266 LCE1DQ5T752 114 aa1.88□□□□□ -2.11
SCN2A-215ENST00000637266 EPPK1P58107 5090 aaKnown RBP1.87□□□□□ -2.11
SCN2A-215ENST00000637266 KRTAP4-7Q9BYR0 210 aa1.86□□□□□ -2.11
SCN2A-215ENST00000637266 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
SCN2A-215ENST00000637266 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
SCN2A-215ENST00000637266 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.12
SCN2A-215ENST00000637266 MT4P47944 62 aa1.83□□□□□ -2.12
SCN2A-215ENST00000637266 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
SCN2A-215ENST00000637266 KRTAP6-2Q3LI66 62 aa1.82□□□□□ -2.12
SCN2A-215ENST00000637266 KRTAP9-2Q9BYQ4 174 aa1.82□□□□□ -2.12
SCN2A-215ENST00000637266 KRTAP2-2Q9BYT5 123 aa1.78□□□□□ -2.12
SCN2A-215ENST00000637266 KRTAP9-6A0A140TA67 174 aa1.77□□□□□ -2.13
SCN2A-215ENST00000637266 LOC100996750A0A140TA64 210 aa1.76□□□□□ -2.13
SCN2A-215ENST00000637266 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
SCN2A-215ENST00000637266 FAT4Q6V0I7 4981 aa1.75□□□□□ -2.13
SCN2A-215ENST00000637266 KRTAP4-3Q9BYR4 195 aa1.69□□□□□ -2.14
SCN2A-215ENST00000637266 MUC12Q9UKN1 5478 aa1.69□□□□□ -2.14
SCN2A-215ENST00000637266 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
SCN2A-215ENST00000637266 KRTAP5-9P26371 169 aa1.67□□□□□ -2.14
SCN2A-215ENST00000637266 KRTAP9-7A8MTY7 169 aa1.66□□□□□ -2.14
SCN2A-215ENST00000637266 KRTAP4-9Q9BYQ8 210 aa1.65□□□□□ -2.15
SCN2A-215ENST00000637266 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
SCN2A-215ENST00000637266 KRTAP9-9Q9BYP9 154 aa1.64□□□□□ -2.15
SCN2A-215ENST00000637266 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
SCN2A-215ENST00000637266 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.63□□□□□ -2.15
SCN2A-215ENST00000637266 LPAP08519 4548 aa1.62□□□□□ -2.15
SCN2A-215ENST00000637266 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
SCN2A-215ENST00000637266 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
SCN2A-215ENST00000637266 LCE1FQ5T754 118 aa1.6□□□□□ -2.15
SCN2A-215ENST00000637266 NEBP20929 6669 aa1.57□□□□□ -2.16
SCN2A-215ENST00000637266 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
SCN2A-215ENST00000637266 KRTAP5-4Q6L8H1 288 aa1.53□□□□□ -2.16
SCN2A-215ENST00000637266 MUC2Q02817 5179 aa1.52□□□□□ -2.17
SCN2A-215ENST00000637266 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
SCN2A-215ENST00000637266 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
SCN2A-215ENST00000637266 MDN1Q9NU22 5596 aa1.46□□□□□ -2.18
SCN2A-215ENST00000637266 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
SCN2A-215ENST00000637266 USH2AO75445 5202 aa1.45□□□□□ -2.18
SCN2A-215ENST00000637266 KMT2DO14686 5537 aa1.44□□□□□ -2.18
SCN2A-215ENST00000637266 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
SCN2A-215ENST00000637266 GPR98Q8WXG9 6306 aa1.39□□□□□ -2.19
SCN2A-215ENST00000637266 KRTAP5-5Q701N2 237 aaPredicted RBP1.38□□□□□ -2.19
SCN2A-215ENST00000637266 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
SCN2A-215ENST00000637266 KRTAP4-11Q9BYQ6 195 aa1.36□□□□□ -2.19
SCN2A-215ENST00000637266 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
SCN2A-215ENST00000637266 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
SCN2A-215ENST00000637266 KRTAP5-3Q6L8H2 238 aa1.34□□□□□ -2.19
SCN2A-215ENST00000637266 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
SCN2A-215ENST00000637266 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
SCN2A-215ENST00000637266 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
SCN2A-215ENST00000637266 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
SCN2A-215ENST00000637266 KRTAP4-6Q9BYQ5 205 aa1.27□□□□□ -2.21
SCN2A-215ENST00000637266 KRTAP5-2Q701N4 177 aa1.21□□□□□ -2.22
SCN2A-215ENST00000637266 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
SCN2A-215ENST00000637266 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
SCN2A-215ENST00000637266 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
SCN2A-215ENST00000637266 KRTAP4-4Q9BYR3 166 aa1.12□□□□□ -2.23
SCN2A-215ENST00000637266 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
SCN2A-215ENST00000637266 KRTAP4-12Q9BQ66 201 aa1.05□□□□□ -2.24
SCN2A-215ENST00000637266 KRTAP4-2Q9BYR5 136 aa1.05□□□□□ -2.24
SCN2A-215ENST00000637266 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
SCN2A-215ENST00000637266 KRTAP5-1Q6L8H4 278 aa0.98□□□□□ -2.25
SCN2A-215ENST00000637266 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
SCN2A-215ENST00000637266 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
SCN2A-215ENST00000637266 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
SCN2A-215ENST00000637266 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 17 ms