RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 KTN1-AS1Q86SY8 53 aa6.65□□□□□ -1.34
CLN6-218ENST00000637223 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
CLN6-218ENST00000637223 TNP1P09430 55 aa6.57□□□□□ -1.36
CLN6-218ENST00000637223 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
CLN6-218ENST00000637223 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
CLN6-218ENST00000637223 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
CLN6-218ENST00000637223 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
CLN6-218ENST00000637223 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
CLN6-218ENST00000637223 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
CLN6-218ENST00000637223 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
CLN6-218ENST00000637223 PRAC1Q96KF2 57 aa6.38□□□□□ -1.39
CLN6-218ENST00000637223 DSTQ03001 7570 aaKnown RBP6.37□□□□□ -1.39
CLN6-218ENST00000637223 MT1EP04732 61 aa6.37□□□□□ -1.39
CLN6-218ENST00000637223 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
CLN6-218ENST00000637223 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
CLN6-218ENST00000637223 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
CLN6-218ENST00000637223 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
CLN6-218ENST00000637223 MT1LQ93083 61 aa6.15□□□□□ -1.42
CLN6-218ENST00000637223 MT1GP13640 62 aa6.11□□□□□ -1.43
CLN6-218ENST00000637223 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
CLN6-218ENST00000637223 MT1MQ8N339 61 aa6.03□□□□□ -1.44
CLN6-218ENST00000637223 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
CLN6-218ENST00000637223 KRTAP5-10Q6L8G5 202 aa5.95□□□□□ -1.46
CLN6-218ENST00000637223 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
CLN6-218ENST00000637223 MT4P47944 62 aa5.93□□□□□ -1.46
CLN6-218ENST00000637223 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
CLN6-218ENST00000637223 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
CLN6-218ENST00000637223 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
CLN6-218ENST00000637223 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
CLN6-218ENST00000637223 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
CLN6-218ENST00000637223 KRTAP5-7Q6L8G8 165 aa5.8□□□□□ -1.48
CLN6-218ENST00000637223 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
CLN6-218ENST00000637223 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
CLN6-218ENST00000637223 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
CLN6-218ENST00000637223 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
CLN6-218ENST00000637223 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
CLN6-218ENST00000637223 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
CLN6-218ENST00000637223 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
CLN6-218ENST00000637223 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
CLN6-218ENST00000637223 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
CLN6-218ENST00000637223 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
CLN6-218ENST00000637223 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
CLN6-218ENST00000637223 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
CLN6-218ENST00000637223 MT1AP04731 61 aa5.22□□□□□ -1.57
CLN6-218ENST00000637223 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
CLN6-218ENST00000637223 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
CLN6-218ENST00000637223 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
CLN6-218ENST00000637223 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
CLN6-218ENST00000637223 MUC5ACP98088 5654 aa5.03□□□□□ -1.6
CLN6-218ENST00000637223 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
CLN6-218ENST00000637223 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
CLN6-218ENST00000637223 KRTAP5-8O75690 187 aa4.94□□□□□ -1.62
CLN6-218ENST00000637223 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
CLN6-218ENST00000637223 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
CLN6-218ENST00000637223 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
CLN6-218ENST00000637223 MT3P25713 68 aa4.76□□□□□ -1.65
CLN6-218ENST00000637223 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
CLN6-218ENST00000637223 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
CLN6-218ENST00000637223 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
CLN6-218ENST00000637223 INE1O15225 51 aa4.35□□□□□ -1.71
CLN6-218ENST00000637223 H3BS24 57 aa4.27□□□□□ -1.73
CLN6-218ENST00000637223 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
CLN6-218ENST00000637223 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
CLN6-218ENST00000637223 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
CLN6-218ENST00000637223 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
CLN6-218ENST00000637223 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
CLN6-218ENST00000637223 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
CLN6-218ENST00000637223 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
CLN6-218ENST00000637223 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
CLN6-218ENST00000637223 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
CLN6-218ENST00000637223 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
CLN6-218ENST00000637223 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
CLN6-218ENST00000637223 PRM1P04553 51 aa3.46□□□□□ -1.86
CLN6-218ENST00000637223 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
CLN6-218ENST00000637223 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CLN6-218ENST00000637223 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
CLN6-218ENST00000637223 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CLN6-218ENST00000637223 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 94.7 ms