RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
CACNA1A-227ENST00000636549 LCE1CQ5T751 118 aa5.44□□□□□ -1.54
CACNA1A-227ENST00000636549 LCE1EQ5T753 118 aa5.44□□□□□ -1.54
CACNA1A-227ENST00000636549 LCE1FQ5T754 118 aa5.44□□□□□ -1.54
CACNA1A-227ENST00000636549 LCE1AQ5T7P2 110 aa5.44□□□□□ -1.54
CACNA1A-227ENST00000636549 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
CACNA1A-227ENST00000636549 MT1MQ8N339 61 aa5.41□□□□□ -1.54
CACNA1A-227ENST00000636549 LRP2P98164 4655 aa5.33□□□□□ -1.56
CACNA1A-227ENST00000636549 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
CACNA1A-227ENST00000636549 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
CACNA1A-227ENST00000636549 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
CACNA1A-227ENST00000636549 HERC1Q15751 4861 aa5.16□□□□□ -1.58
CACNA1A-227ENST00000636549 HERC2O95714 4834 aa5.15□□□□□ -1.59
CACNA1A-227ENST00000636549 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
CACNA1A-227ENST00000636549 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
CACNA1A-227ENST00000636549 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
CACNA1A-227ENST00000636549 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
CACNA1A-227ENST00000636549 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
CACNA1A-227ENST00000636549 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
CACNA1A-227ENST00000636549 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
CACNA1A-227ENST00000636549 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
CACNA1A-227ENST00000636549 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
CACNA1A-227ENST00000636549 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
CACNA1A-227ENST00000636549 MT1AP04731 61 aa4.88□□□□□ -1.63
CACNA1A-227ENST00000636549 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
CACNA1A-227ENST00000636549 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
CACNA1A-227ENST00000636549 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
CACNA1A-227ENST00000636549 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
CACNA1A-227ENST00000636549 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
CACNA1A-227ENST00000636549 RNF213Q63HN8 5207 aa4.75□□□□□ -1.65
CACNA1A-227ENST00000636549 UBR4Q5T4S7 5183 aa4.72□□□□□ -1.65
CACNA1A-227ENST00000636549 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
CACNA1A-227ENST00000636549 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
CACNA1A-227ENST00000636549 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
CACNA1A-227ENST00000636549 MUC2Q02817 5179 aa4.64□□□□□ -1.67
CACNA1A-227ENST00000636549 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
CACNA1A-227ENST00000636549 FAT4Q6V0I7 4981 aa4.58□□□□□ -1.68
CACNA1A-227ENST00000636549 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
CACNA1A-227ENST00000636549 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
CACNA1A-227ENST00000636549 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
CACNA1A-227ENST00000636549 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
CACNA1A-227ENST00000636549 KRTAP4-4Q9BYR3 166 aa4.38□□□□□ -1.71
CACNA1A-227ENST00000636549 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
CACNA1A-227ENST00000636549 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
CACNA1A-227ENST00000636549 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
CACNA1A-227ENST00000636549 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
CACNA1A-227ENST00000636549 USH2AO75445 5202 aa4.09□□□□□ -1.75
CACNA1A-227ENST00000636549 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
CACNA1A-227ENST00000636549 KMT2DO14686 5537 aa4.03□□□□□ -1.76
CACNA1A-227ENST00000636549 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
CACNA1A-227ENST00000636549 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
CACNA1A-227ENST00000636549 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
CACNA1A-227ENST00000636549 NEBP20929 6669 aa3.75□□□□□ -1.81
CACNA1A-227ENST00000636549 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
CACNA1A-227ENST00000636549 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
CACNA1A-227ENST00000636549 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
CACNA1A-227ENST00000636549 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
CACNA1A-227ENST00000636549 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
CACNA1A-227ENST00000636549 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
CACNA1A-227ENST00000636549 MDN1Q9NU22 5596 aa3.21□□□□□ -1.9
CACNA1A-227ENST00000636549 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
CACNA1A-227ENST00000636549 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
CACNA1A-227ENST00000636549 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
CACNA1A-227ENST00000636549 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
CACNA1A-227ENST00000636549 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
CACNA1A-227ENST00000636549 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
CACNA1A-227ENST00000636549 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
CACNA1A-227ENST00000636549 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
CACNA1A-227ENST00000636549 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CACNA1A-227ENST00000636549 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CACNA1A-227ENST00000636549 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
CACNA1A-227ENST00000636549 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
CACNA1A-227ENST00000636549 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CACNA1A-227ENST00000636549 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
CACNA1A-227ENST00000636549 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
CACNA1A-227ENST00000636549 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
CACNA1A-227ENST00000636549 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms