RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 KRTAP9-2Q9BYQ4 174 aa2.02□□□□□ -2.09
PDE4D-228ENST00000636120 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
PDE4D-228ENST00000636120 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
PDE4D-228ENST00000636120 FAT4Q6V0I7 4981 aa1.94□□□□□ -2.1
PDE4D-228ENST00000636120 MT1AP04731 61 aa1.94□□□□□ -2.1
PDE4D-228ENST00000636120 LOC100996750A0A140TA64 210 aa1.93□□□□□ -2.1
PDE4D-228ENST00000636120 HMCN2Q8NDA2 5059 aa1.93□□□□□ -2.1
PDE4D-228ENST00000636120 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
PDE4D-228ENST00000636120 KRTAP9-6A0A140TA67 174 aa1.92□□□□□ -2.1
PDE4D-228ENST00000636120 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
PDE4D-228ENST00000636120 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
PDE4D-228ENST00000636120 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
PDE4D-228ENST00000636120 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
PDE4D-228ENST00000636120 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
PDE4D-228ENST00000636120 MT4P47944 62 aa1.89□□□□□ -2.11
PDE4D-228ENST00000636120 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
PDE4D-228ENST00000636120 PRM1P04553 51 aa1.85□□□□□ -2.11
PDE4D-228ENST00000636120 LCE5AQ5TCM9 118 aa1.84□□□□□ -2.11
PDE4D-228ENST00000636120 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
PDE4D-228ENST00000636120 LCE4AQ5TA78 99 aa1.81□□□□□ -2.12
PDE4D-228ENST00000636120 KRTAP9-4Q9BYQ2 154 aa1.81□□□□□ -2.12
PDE4D-228ENST00000636120 KRTAP9-7A8MTY7 169 aa1.79□□□□□ -2.12
PDE4D-228ENST00000636120 LCE1DQ5T752 114 aa1.78□□□□□ -2.12
PDE4D-228ENST00000636120 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.78□□□□□ -2.13
PDE4D-228ENST00000636120 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.13
PDE4D-228ENST00000636120 KRTAP9-6A8MVA2 160 aa1.77□□□□□ -2.13
PDE4D-228ENST00000636120 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
PDE4D-228ENST00000636120 UBR4Q5T4S7 5183 aa1.75□□□□□ -2.13
PDE4D-228ENST00000636120 KRTAP4-9Q9BYQ8 210 aa1.74□□□□□ -2.13
PDE4D-228ENST00000636120 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
PDE4D-228ENST00000636120 KRTAP2-2Q9BYT5 123 aa1.73□□□□□ -2.13
PDE4D-228ENST00000636120 KRTAP5-9P26371 169 aa1.67□□□□□ -2.14
PDE4D-228ENST00000636120 MUC2Q02817 5179 aa1.62□□□□□ -2.15
PDE4D-228ENST00000636120 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
PDE4D-228ENST00000636120 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.16
PDE4D-228ENST00000636120 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.16
PDE4D-228ENST00000636120 USH2AO75445 5202 aa1.58□□□□□ -2.16
PDE4D-228ENST00000636120 SSPOA2VEC9 5147 aa1.53□□□□□ -2.16
PDE4D-228ENST00000636120 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
PDE4D-228ENST00000636120 NEBP20929 6669 aa1.5□□□□□ -2.17
PDE4D-228ENST00000636120 KRTAP9-9Q9BYP9 154 aa1.48□□□□□ -2.17
PDE4D-228ENST00000636120 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
PDE4D-228ENST00000636120 LCE1EQ5T753 118 aa1.48□□□□□ -2.17
PDE4D-228ENST00000636120 LCE1FQ5T754 118 aa1.48□□□□□ -2.17
PDE4D-228ENST00000636120 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
PDE4D-228ENST00000636120 KRTAP4-6Q9BYQ5 205 aa1.46□□□□□ -2.18
PDE4D-228ENST00000636120 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
PDE4D-228ENST00000636120 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
PDE4D-228ENST00000636120 KMT2DO14686 5537 aa1.43□□□□□ -2.18
PDE4D-228ENST00000636120 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
PDE4D-228ENST00000636120 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
PDE4D-228ENST00000636120 OBSCNQ5VST9 7968 aa1.41□□□□□ -2.18
PDE4D-228ENST00000636120 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
PDE4D-228ENST00000636120 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
PDE4D-228ENST00000636120 KRTAP4-11Q9BYQ6 195 aa1.33□□□□□ -2.2
PDE4D-228ENST00000636120 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
PDE4D-228ENST00000636120 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.2
PDE4D-228ENST00000636120 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
PDE4D-228ENST00000636120 KRTAP5-3Q6L8H2 238 aa1.26□□□□□ -2.21
PDE4D-228ENST00000636120 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
PDE4D-228ENST00000636120 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
PDE4D-228ENST00000636120 KRTAP4-12Q9BQ66 201 aa1.2□□□□□ -2.22
PDE4D-228ENST00000636120 KRTAP4-2Q9BYR5 136 aa1.2□□□□□ -2.22
PDE4D-228ENST00000636120 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
PDE4D-228ENST00000636120 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
PDE4D-228ENST00000636120 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
PDE4D-228ENST00000636120 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.09□□□□□ -2.23
PDE4D-228ENST00000636120 MUC5ACP98088 5654 aa1.09□□□□□ -2.23
PDE4D-228ENST00000636120 KRTAP5-8O75690 187 aa1.09□□□□□ -2.24
PDE4D-228ENST00000636120 KRTAP5-11Q6L8G4 156 aa1.03□□□□□ -2.24
PDE4D-228ENST00000636120 KRTAP5-1Q6L8H4 278 aa1□□□□□ -2.25
PDE4D-228ENST00000636120 MUC19Q7Z5P9 8384 aa0.99□□□□□ -2.25
PDE4D-228ENST00000636120 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
PDE4D-228ENST00000636120 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
PDE4D-228ENST00000636120 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
PDE4D-228ENST00000636120 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
PDE4D-228ENST00000636120 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 115.2 ms