RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
SPTAN1-228ENST00000635853 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
SPTAN1-228ENST00000635853 MT1LQ93083 61 aa3.06□□□□□ -1.92
SPTAN1-228ENST00000635853 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
SPTAN1-228ENST00000635853 MT1EP04732 61 aa3.03□□□□□ -1.92
SPTAN1-228ENST00000635853 KRTAP9-2Q9BYQ4 174 aa3.02□□□□□ -1.93
SPTAN1-228ENST00000635853 LRP2P98164 4655 aa3.02□□□□□ -1.93
SPTAN1-228ENST00000635853 UBR4Q5T4S7 5183 aa3.02□□□□□ -1.93
SPTAN1-228ENST00000635853 LPAP08519 4548 aa3.02□□□□□ -1.93
SPTAN1-228ENST00000635853 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
SPTAN1-228ENST00000635853 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
SPTAN1-228ENST00000635853 MT1MQ8N339 61 aa2.96□□□□□ -1.94
SPTAN1-228ENST00000635853 MUC2Q02817 5179 aa2.95□□□□□ -1.94
SPTAN1-228ENST00000635853 KRTAP9-6A0A140TA67 174 aa2.95□□□□□ -1.94
SPTAN1-228ENST00000635853 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
SPTAN1-228ENST00000635853 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
SPTAN1-228ENST00000635853 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
SPTAN1-228ENST00000635853 MT1AP04731 61 aa2.86□□□□□ -1.95
SPTAN1-228ENST00000635853 HMCN2Q8NDA2 5059 aa2.86□□□□□ -1.95
SPTAN1-228ENST00000635853 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
SPTAN1-228ENST00000635853 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
SPTAN1-228ENST00000635853 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
SPTAN1-228ENST00000635853 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
SPTAN1-228ENST00000635853 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SPTAN1-228ENST00000635853 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
SPTAN1-228ENST00000635853 FAT4Q6V0I7 4981 aa2.78□□□□□ -1.96
SPTAN1-228ENST00000635853 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
SPTAN1-228ENST00000635853 KRTAP4-9Q9BYQ8 210 aa2.76□□□□□ -1.97
SPTAN1-228ENST00000635853 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
SPTAN1-228ENST00000635853 LCE2AQ5TA79 106 aaPredicted RBP2.7□□□□□ -1.98
SPTAN1-228ENST00000635853 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
SPTAN1-228ENST00000635853 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
SPTAN1-228ENST00000635853 FSIP2Q5CZC0 6907 aa2.63□□□□□ -1.99
SPTAN1-228ENST00000635853 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
SPTAN1-228ENST00000635853 KRTAP9-4Q9BYQ2 154 aa2.59□□□□□ -1.99
SPTAN1-228ENST00000635853 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
SPTAN1-228ENST00000635853 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
SPTAN1-228ENST00000635853 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.56□□□□□ -2
SPTAN1-228ENST00000635853 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
SPTAN1-228ENST00000635853 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
SPTAN1-228ENST00000635853 USH2AO75445 5202 aa2.52□□□□□ -2.01
SPTAN1-228ENST00000635853 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
SPTAN1-228ENST00000635853 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
SPTAN1-228ENST00000635853 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
SPTAN1-228ENST00000635853 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
SPTAN1-228ENST00000635853 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
SPTAN1-228ENST00000635853 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
SPTAN1-228ENST00000635853 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
SPTAN1-228ENST00000635853 MACF1Q9UPN3 7388 aaKnown RBP2.19□□□□□ -2.06
SPTAN1-228ENST00000635853 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
SPTAN1-228ENST00000635853 NEBP20929 6669 aa2.15□□□□□ -2.06
SPTAN1-228ENST00000635853 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
SPTAN1-228ENST00000635853 KMT2DO14686 5537 aa2.13□□□□□ -2.07
SPTAN1-228ENST00000635853 KRTAP5-9P26371 169 aa2.12□□□□□ -2.07
SPTAN1-228ENST00000635853 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
SPTAN1-228ENST00000635853 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
SPTAN1-228ENST00000635853 KRTAP4-6Q9BYQ5 205 aa2.11□□□□□ -2.07
SPTAN1-228ENST00000635853 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
SPTAN1-228ENST00000635853 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
SPTAN1-228ENST00000635853 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
SPTAN1-228ENST00000635853 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SPTAN1-228ENST00000635853 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
SPTAN1-228ENST00000635853 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
SPTAN1-228ENST00000635853 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
SPTAN1-228ENST00000635853 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
SPTAN1-228ENST00000635853 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
SPTAN1-228ENST00000635853 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
SPTAN1-228ENST00000635853 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.16
SPTAN1-228ENST00000635853 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
SPTAN1-228ENST00000635853 KRTAP5-8O75690 187 aa1.54□□□□□ -2.16
SPTAN1-228ENST00000635853 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
SPTAN1-228ENST00000635853 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
SPTAN1-228ENST00000635853 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
SPTAN1-228ENST00000635853 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
SPTAN1-228ENST00000635853 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
SPTAN1-228ENST00000635853 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
SPTAN1-228ENST00000635853 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
SPTAN1-228ENST00000635853 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 106 ms