RNA–Protein interactions for RNA: ENST00000635806.1

SPTAN1-227, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-227ENST00000635806 HMCN2Q8NDA2 5059 aa1.58□□□□□ -2.16
SPTAN1-227ENST00000635806 FSIP2Q5CZC0 6907 aa1.56□□□□□ -2.16
SPTAN1-227ENST00000635806 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
SPTAN1-227ENST00000635806 KRTAP4-9Q9BYQ8 210 aa1.54□□□□□ -2.16
SPTAN1-227ENST00000635806 KRTAP9-7A8MTY7 169 aa1.51□□□□□ -2.17
SPTAN1-227ENST00000635806 KRTAP4-2Q9BYR5 136 aa1.51□□□□□ -2.17
SPTAN1-227ENST00000635806 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
SPTAN1-227ENST00000635806 MT1EP04732 61 aa1.5□□□□□ -2.17
SPTAN1-227ENST00000635806 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
SPTAN1-227ENST00000635806 RNF213Q63HN8 5207 aa1.49□□□□□ -2.17
SPTAN1-227ENST00000635806 MT1LQ93083 61 aa1.49□□□□□ -2.17
SPTAN1-227ENST00000635806 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
SPTAN1-227ENST00000635806 KRTAP4-11Q9BYQ6 195 aa1.48□□□□□ -2.17
SPTAN1-227ENST00000635806 LCE5AQ5TCM9 118 aa1.44□□□□□ -2.18
SPTAN1-227ENST00000635806 LCE4AQ5TA78 99 aa1.43□□□□□ -2.18
SPTAN1-227ENST00000635806 MT1GP13640 62 aa1.41□□□□□ -2.18
SPTAN1-227ENST00000635806 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
SPTAN1-227ENST00000635806 MT1AP04731 61 aa1.39□□□□□ -2.19
SPTAN1-227ENST00000635806 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
SPTAN1-227ENST00000635806 KRTAP19-3Q7Z4W3 81 aa1.38□□□□□ -2.19
SPTAN1-227ENST00000635806 NEBP20929 6669 aa1.38□□□□□ -2.19
SPTAN1-227ENST00000635806 SYNE2Q8WXH0 6885 aaKnown RBP1.37□□□□□ -2.19
SPTAN1-227ENST00000635806 KRTAP5-3Q6L8H2 238 aa1.37□□□□□ -2.19
SPTAN1-227ENST00000635806 MT1MQ8N339 61 aa1.37□□□□□ -2.19
SPTAN1-227ENST00000635806 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
SPTAN1-227ENST00000635806 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
SPTAN1-227ENST00000635806 LCE3EQ5T5B0 92 aa1.32□□□□□ -2.2
SPTAN1-227ENST00000635806 LCE3DQ9BYE3 92 aa1.31□□□□□ -2.2
SPTAN1-227ENST00000635806 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
SPTAN1-227ENST00000635806 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
SPTAN1-227ENST00000635806 USH2AO75445 5202 aa1.27□□□□□ -2.21
SPTAN1-227ENST00000635806 KRTAP4-3Q9BYR4 195 aa1.25□□□□□ -2.21
SPTAN1-227ENST00000635806 KMT2DO14686 5537 aa1.25□□□□□ -2.21
SPTAN1-227ENST00000635806 MACF1Q9UPN3 7388 aaKnown RBP1.24□□□□□ -2.21
SPTAN1-227ENST00000635806 PRM1P04553 51 aa1.24□□□□□ -2.21
SPTAN1-227ENST00000635806 SPRR2AP35326 72 aa1.23□□□□□ -2.21
SPTAN1-227ENST00000635806 KRTAP5-5Q701N2 237 aaPredicted RBP1.22□□□□□ -2.21
SPTAN1-227ENST00000635806 KRTAP6-1Q3LI64 71 aa1.21□□□□□ -2.22
SPTAN1-227ENST00000635806 KRTAP6-3Q3LI67 103 aa1.19□□□□□ -2.22
SPTAN1-227ENST00000635806 LCE1AQ5T7P2 110 aa1.19□□□□□ -2.22
SPTAN1-227ENST00000635806 SYNE1Q8NF91 8797 aaKnown RBP1.18□□□□□ -2.22
SPTAN1-227ENST00000635806 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
SPTAN1-227ENST00000635806 SPRR2BP35325 72 aa1.18□□□□□ -2.22
SPTAN1-227ENST00000635806 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
SPTAN1-227ENST00000635806 SPRR2EP22531 72 aa1.17□□□□□ -2.22
SPTAN1-227ENST00000635806 MT3P25713 68 aa1.17□□□□□ -2.22
SPTAN1-227ENST00000635806 KRTAP5-9P26371 169 aa1.16□□□□□ -2.22
SPTAN1-227ENST00000635806 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
SPTAN1-227ENST00000635806 KRTAP2-2Q9BYT5 123 aa1.14□□□□□ -2.23
SPTAN1-227ENST00000635806 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
SPTAN1-227ENST00000635806 SPRR2DP22532 72 aa1.1□□□□□ -2.23
SPTAN1-227ENST00000635806 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
SPTAN1-227ENST00000635806 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
SPTAN1-227ENST00000635806 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
SPTAN1-227ENST00000635806 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.04□□□□□ -2.24
SPTAN1-227ENST00000635806 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
SPTAN1-227ENST00000635806 KRTAP5-4Q6L8H1 288 aa1.03□□□□□ -2.24
SPTAN1-227ENST00000635806 DSTQ03001 7570 aaKnown RBP1.03□□□□□ -2.25
SPTAN1-227ENST00000635806 KRTAP5-2Q701N4 177 aa0.99□□□□□ -2.25
SPTAN1-227ENST00000635806 LCE1EQ5T753 118 aa0.97□□□□□ -2.25
SPTAN1-227ENST00000635806 KRTAP5-11Q6L8G4 156 aa0.97□□□□□ -2.25
SPTAN1-227ENST00000635806 HMCN1Q96RW7 5635 aa0.96□□□□□ -2.26
SPTAN1-227ENST00000635806 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
SPTAN1-227ENST00000635806 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
SPTAN1-227ENST00000635806 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
SPTAN1-227ENST00000635806 OBSCNQ5VST9 7968 aa0.93□□□□□ -2.26
SPTAN1-227ENST00000635806 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
SPTAN1-227ENST00000635806 LCE1CQ5T751 118 aa0.89□□□□□ -2.27
SPTAN1-227ENST00000635806 LCE1BQ5T7P3 118 aa0.89□□□□□ -2.27
SPTAN1-227ENST00000635806 MT4P47944 62 aa0.85□□□□□ -2.27
SPTAN1-227ENST00000635806 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
SPTAN1-227ENST00000635806 KRTAP4-4Q9BYR3 166 aa0.83□□□□□ -2.28
SPTAN1-227ENST00000635806 KRTAP5-8O75690 187 aa0.81□□□□□ -2.28
SPTAN1-227ENST00000635806 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
SPTAN1-227ENST00000635806 LCE1FQ5T754 118 aa0.7□□□□□ -2.3
SPTAN1-227ENST00000635806 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
SPTAN1-227ENST00000635806 MUC19Q7Z5P9 8384 aa0.58□□□□□ -2.32
SPTAN1-227ENST00000635806 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 74.1 ms