RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
CLN6-210ENST00000635747 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
CLN6-210ENST00000635747 TNP1P09430 55 aa6.63□□□□□ -1.35
CLN6-210ENST00000635747 MT1GP13640 62 aa6.63□□□□□ -1.35
CLN6-210ENST00000635747 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
CLN6-210ENST00000635747 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
CLN6-210ENST00000635747 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
CLN6-210ENST00000635747 MT1LQ93083 61 aa6.49□□□□□ -1.37
CLN6-210ENST00000635747 MT1MQ8N339 61 aa6.47□□□□□ -1.37
CLN6-210ENST00000635747 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
CLN6-210ENST00000635747 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
CLN6-210ENST00000635747 BRK1Q8WUW1 75 aa6.39□□□□□ -1.39
CLN6-210ENST00000635747 ROMO1P60602 79 aa6.35□□□□□ -1.39
CLN6-210ENST00000635747 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
CLN6-210ENST00000635747 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
CLN6-210ENST00000635747 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
CLN6-210ENST00000635747 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
CLN6-210ENST00000635747 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
CLN6-210ENST00000635747 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.41
CLN6-210ENST00000635747 MT4P47944 62 aa6.21□□□□□ -1.42
CLN6-210ENST00000635747 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.42
CLN6-210ENST00000635747 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
CLN6-210ENST00000635747 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
CLN6-210ENST00000635747 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
CLN6-210ENST00000635747 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
CLN6-210ENST00000635747 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
CLN6-210ENST00000635747 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
CLN6-210ENST00000635747 AHNAK2Q8IVF2 5795 aa5.94□□□□□ -1.46
CLN6-210ENST00000635747 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
CLN6-210ENST00000635747 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
CLN6-210ENST00000635747 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
CLN6-210ENST00000635747 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
CLN6-210ENST00000635747 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
CLN6-210ENST00000635747 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
CLN6-210ENST00000635747 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
CLN6-210ENST00000635747 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
CLN6-210ENST00000635747 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
CLN6-210ENST00000635747 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
CLN6-210ENST00000635747 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
CLN6-210ENST00000635747 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
CLN6-210ENST00000635747 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
CLN6-210ENST00000635747 MT1AP04731 61 aa5.54□□□□□ -1.52
CLN6-210ENST00000635747 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
CLN6-210ENST00000635747 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
CLN6-210ENST00000635747 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
CLN6-210ENST00000635747 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
CLN6-210ENST00000635747 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
CLN6-210ENST00000635747 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
CLN6-210ENST00000635747 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
CLN6-210ENST00000635747 MT3P25713 68 aa5.11□□□□□ -1.59
CLN6-210ENST00000635747 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
CLN6-210ENST00000635747 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
CLN6-210ENST00000635747 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
CLN6-210ENST00000635747 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
CLN6-210ENST00000635747 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
CLN6-210ENST00000635747 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
CLN6-210ENST00000635747 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
CLN6-210ENST00000635747 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
CLN6-210ENST00000635747 H3BS24 57 aa4.63□□□□□ -1.67
CLN6-210ENST00000635747 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
CLN6-210ENST00000635747 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
CLN6-210ENST00000635747 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
CLN6-210ENST00000635747 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
CLN6-210ENST00000635747 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
CLN6-210ENST00000635747 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
CLN6-210ENST00000635747 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CLN6-210ENST00000635747 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
CLN6-210ENST00000635747 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
CLN6-210ENST00000635747 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
CLN6-210ENST00000635747 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
CLN6-210ENST00000635747 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
CLN6-210ENST00000635747 INE1O15225 51 aa3.59□□□□□ -1.83
CLN6-210ENST00000635747 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
CLN6-210ENST00000635747 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
CLN6-210ENST00000635747 PRM1P04553 51 aa3.24□□□□□ -1.89
CLN6-210ENST00000635747 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
CLN6-210ENST00000635747 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CLN6-210ENST00000635747 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 111.1 ms