RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
SMARCA2-246ENST00000635739 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
SMARCA2-246ENST00000635739 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
SMARCA2-246ENST00000635739 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.95
SMARCA2-246ENST00000635739 SPRR2DP22532 72 aa2.83□□□□□ -1.96
SMARCA2-246ENST00000635739 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
SMARCA2-246ENST00000635739 MT1LQ93083 61 aa2.8□□□□□ -1.96
SMARCA2-246ENST00000635739 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
SMARCA2-246ENST00000635739 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
SMARCA2-246ENST00000635739 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
SMARCA2-246ENST00000635739 MT1EP04732 61 aa2.76□□□□□ -1.97
SMARCA2-246ENST00000635739 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
SMARCA2-246ENST00000635739 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
SMARCA2-246ENST00000635739 MT1GP13640 62 aa2.73□□□□□ -1.97
SMARCA2-246ENST00000635739 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
SMARCA2-246ENST00000635739 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
SMARCA2-246ENST00000635739 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.67□□□□□ -1.98
SMARCA2-246ENST00000635739 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
SMARCA2-246ENST00000635739 LOC100996750A0A140TA64 210 aa2.65□□□□□ -1.99
SMARCA2-246ENST00000635739 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
SMARCA2-246ENST00000635739 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
SMARCA2-246ENST00000635739 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
SMARCA2-246ENST00000635739 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
SMARCA2-246ENST00000635739 MT1MQ8N339 61 aa2.6□□□□□ -1.99
SMARCA2-246ENST00000635739 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
SMARCA2-246ENST00000635739 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
SMARCA2-246ENST00000635739 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
SMARCA2-246ENST00000635739 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SMARCA2-246ENST00000635739 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
SMARCA2-246ENST00000635739 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
SMARCA2-246ENST00000635739 KRTAP2-2Q9BYT5 123 aa2.5□□□□□ -2.01
SMARCA2-246ENST00000635739 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
SMARCA2-246ENST00000635739 PRM1P04553 51 aa2.46□□□□□ -2.02
SMARCA2-246ENST00000635739 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
SMARCA2-246ENST00000635739 MT4P47944 62 aa2.45□□□□□ -2.02
SMARCA2-246ENST00000635739 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
SMARCA2-246ENST00000635739 MT1AP04731 61 aa2.43□□□□□ -2.02
SMARCA2-246ENST00000635739 LCE5AQ5TCM9 118 aa2.39□□□□□ -2.03
SMARCA2-246ENST00000635739 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
SMARCA2-246ENST00000635739 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
SMARCA2-246ENST00000635739 LCE4AQ5TA78 99 aa2.33□□□□□ -2.04
SMARCA2-246ENST00000635739 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
SMARCA2-246ENST00000635739 NEBP20929 6669 aa2.27□□□□□ -2.05
SMARCA2-246ENST00000635739 MT3P25713 68 aa2.26□□□□□ -2.05
SMARCA2-246ENST00000635739 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
SMARCA2-246ENST00000635739 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
SMARCA2-246ENST00000635739 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
SMARCA2-246ENST00000635739 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
SMARCA2-246ENST00000635739 LCE1DQ5T752 114 aa2.13□□□□□ -2.07
SMARCA2-246ENST00000635739 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
SMARCA2-246ENST00000635739 KRTAP9-9Q9BYP9 154 aa2.06□□□□□ -2.08
SMARCA2-246ENST00000635739 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SMARCA2-246ENST00000635739 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SMARCA2-246ENST00000635739 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
SMARCA2-246ENST00000635739 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
SMARCA2-246ENST00000635739 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
SMARCA2-246ENST00000635739 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
SMARCA2-246ENST00000635739 KRTAP5-4Q6L8H1 288 aa1.86□□□□□ -2.11
SMARCA2-246ENST00000635739 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
SMARCA2-246ENST00000635739 KRTAP4-11Q9BYQ6 195 aa1.83□□□□□ -2.12
SMARCA2-246ENST00000635739 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
SMARCA2-246ENST00000635739 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
SMARCA2-246ENST00000635739 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
SMARCA2-246ENST00000635739 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
SMARCA2-246ENST00000635739 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
SMARCA2-246ENST00000635739 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
SMARCA2-246ENST00000635739 KRTAP5-8O75690 187 aa1.54□□□□□ -2.16
SMARCA2-246ENST00000635739 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
SMARCA2-246ENST00000635739 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
SMARCA2-246ENST00000635739 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
SMARCA2-246ENST00000635739 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
SMARCA2-246ENST00000635739 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
SMARCA2-246ENST00000635739 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
SMARCA2-246ENST00000635739 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
SMARCA2-246ENST00000635739 PHGR1C9JFL3 82 aa1.4□□□□□ -2.18
SMARCA2-246ENST00000635739 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
SMARCA2-246ENST00000635739 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
SMARCA2-246ENST00000635739 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms