RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
HSPG2-214ENST00000635682 MT1EP04732 61 aa5.45□□□□□ -1.54
HSPG2-214ENST00000635682 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
HSPG2-214ENST00000635682 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
HSPG2-214ENST00000635682 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
HSPG2-214ENST00000635682 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
HSPG2-214ENST00000635682 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
HSPG2-214ENST00000635682 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
HSPG2-214ENST00000635682 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
HSPG2-214ENST00000635682 MT1GP13640 62 aa5.31□□□□□ -1.56
HSPG2-214ENST00000635682 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
HSPG2-214ENST00000635682 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
HSPG2-214ENST00000635682 MT1LQ93083 61 aa5.25□□□□□ -1.57
HSPG2-214ENST00000635682 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
HSPG2-214ENST00000635682 ROMO1P60602 79 aa5.22□□□□□ -1.57
HSPG2-214ENST00000635682 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
HSPG2-214ENST00000635682 MT4P47944 62 aa5.2□□□□□ -1.58
HSPG2-214ENST00000635682 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
HSPG2-214ENST00000635682 MT1MQ8N339 61 aa5.18□□□□□ -1.58
HSPG2-214ENST00000635682 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
HSPG2-214ENST00000635682 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
HSPG2-214ENST00000635682 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
HSPG2-214ENST00000635682 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
HSPG2-214ENST00000635682 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
HSPG2-214ENST00000635682 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
HSPG2-214ENST00000635682 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
HSPG2-214ENST00000635682 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
HSPG2-214ENST00000635682 KRTAP5-10Q6L8G5 202 aa4.98□□□□□ -1.61
HSPG2-214ENST00000635682 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
HSPG2-214ENST00000635682 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
HSPG2-214ENST00000635682 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
HSPG2-214ENST00000635682 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
HSPG2-214ENST00000635682 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
HSPG2-214ENST00000635682 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
HSPG2-214ENST00000635682 KRTAP5-5Q701N2 237 aaPredicted RBP4.74□□□□□ -1.65
HSPG2-214ENST00000635682 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
HSPG2-214ENST00000635682 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
HSPG2-214ENST00000635682 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
HSPG2-214ENST00000635682 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
HSPG2-214ENST00000635682 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
HSPG2-214ENST00000635682 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
HSPG2-214ENST00000635682 MT1AP04731 61 aa4.49□□□□□ -1.69
HSPG2-214ENST00000635682 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
HSPG2-214ENST00000635682 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
HSPG2-214ENST00000635682 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
HSPG2-214ENST00000635682 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
HSPG2-214ENST00000635682 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
HSPG2-214ENST00000635682 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
HSPG2-214ENST00000635682 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
HSPG2-214ENST00000635682 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
HSPG2-214ENST00000635682 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
HSPG2-214ENST00000635682 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
HSPG2-214ENST00000635682 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
HSPG2-214ENST00000635682 MT3P25713 68 aa4.15□□□□□ -1.75
HSPG2-214ENST00000635682 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
HSPG2-214ENST00000635682 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
HSPG2-214ENST00000635682 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
HSPG2-214ENST00000635682 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
HSPG2-214ENST00000635682 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
HSPG2-214ENST00000635682 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
HSPG2-214ENST00000635682 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
HSPG2-214ENST00000635682 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
HSPG2-214ENST00000635682 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
HSPG2-214ENST00000635682 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
HSPG2-214ENST00000635682 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
HSPG2-214ENST00000635682 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
HSPG2-214ENST00000635682 INE1O15225 51 aa3.15□□□□□ -1.91
HSPG2-214ENST00000635682 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
HSPG2-214ENST00000635682 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
HSPG2-214ENST00000635682 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
HSPG2-214ENST00000635682 H3BS24 57 aa2.99□□□□□ -1.93
HSPG2-214ENST00000635682 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
HSPG2-214ENST00000635682 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
HSPG2-214ENST00000635682 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
HSPG2-214ENST00000635682 PRM1P04553 51 aa2.65□□□□□ -1.99
HSPG2-214ENST00000635682 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
HSPG2-214ENST00000635682 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
HSPG2-214ENST00000635682 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms