RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.76
PHACTR4-206ENST00000632421 MT1GP13640 62 aa4.06□□□□□ -1.76
PHACTR4-206ENST00000632421 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
PHACTR4-206ENST00000632421 MT1MQ8N339 61 aa4.05□□□□□ -1.76
PHACTR4-206ENST00000632421 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
PHACTR4-206ENST00000632421 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
PHACTR4-206ENST00000632421 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
PHACTR4-206ENST00000632421 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
PHACTR4-206ENST00000632421 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
PHACTR4-206ENST00000632421 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
PHACTR4-206ENST00000632421 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
PHACTR4-206ENST00000632421 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
PHACTR4-206ENST00000632421 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
PHACTR4-206ENST00000632421 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
PHACTR4-206ENST00000632421 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
PHACTR4-206ENST00000632421 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
PHACTR4-206ENST00000632421 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
PHACTR4-206ENST00000632421 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
PHACTR4-206ENST00000632421 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
PHACTR4-206ENST00000632421 SPRR2EP22531 72 aa3.72□□□□□ -1.81
PHACTR4-206ENST00000632421 SPRR2BP35325 72 aa3.72□□□□□ -1.81
PHACTR4-206ENST00000632421 SPRR2AP35326 72 aa3.72□□□□□ -1.81
PHACTR4-206ENST00000632421 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
PHACTR4-206ENST00000632421 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
PHACTR4-206ENST00000632421 MT1AP04731 61 aa3.63□□□□□ -1.83
PHACTR4-206ENST00000632421 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
PHACTR4-206ENST00000632421 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
PHACTR4-206ENST00000632421 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
PHACTR4-206ENST00000632421 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
PHACTR4-206ENST00000632421 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.6□□□□□ -1.83
PHACTR4-206ENST00000632421 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
PHACTR4-206ENST00000632421 SPRR2DP22532 72 aa3.58□□□□□ -1.84
PHACTR4-206ENST00000632421 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
PHACTR4-206ENST00000632421 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
PHACTR4-206ENST00000632421 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
PHACTR4-206ENST00000632421 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
PHACTR4-206ENST00000632421 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
PHACTR4-206ENST00000632421 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
PHACTR4-206ENST00000632421 PRM1P04553 51 aa3.36□□□□□ -1.87
PHACTR4-206ENST00000632421 NEBP20929 6669 aa3.33□□□□□ -1.88
PHACTR4-206ENST00000632421 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
PHACTR4-206ENST00000632421 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
PHACTR4-206ENST00000632421 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
PHACTR4-206ENST00000632421 MT3P25713 68 aa3.27□□□□□ -1.89
PHACTR4-206ENST00000632421 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
PHACTR4-206ENST00000632421 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
PHACTR4-206ENST00000632421 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
PHACTR4-206ENST00000632421 MT4P47944 62 aa3.12□□□□□ -1.91
PHACTR4-206ENST00000632421 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
PHACTR4-206ENST00000632421 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
PHACTR4-206ENST00000632421 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
PHACTR4-206ENST00000632421 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
PHACTR4-206ENST00000632421 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
PHACTR4-206ENST00000632421 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
PHACTR4-206ENST00000632421 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
PHACTR4-206ENST00000632421 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
PHACTR4-206ENST00000632421 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
PHACTR4-206ENST00000632421 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
PHACTR4-206ENST00000632421 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
PHACTR4-206ENST00000632421 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
PHACTR4-206ENST00000632421 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
PHACTR4-206ENST00000632421 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
PHACTR4-206ENST00000632421 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
PHACTR4-206ENST00000632421 LCE1CQ5T751 118 aa2.57□□□□□ -2
PHACTR4-206ENST00000632421 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
PHACTR4-206ENST00000632421 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
PHACTR4-206ENST00000632421 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
PHACTR4-206ENST00000632421 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
PHACTR4-206ENST00000632421 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
PHACTR4-206ENST00000632421 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
PHACTR4-206ENST00000632421 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
PHACTR4-206ENST00000632421 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
PHACTR4-206ENST00000632421 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PHACTR4-206ENST00000632421 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
PHACTR4-206ENST00000632421 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
PHACTR4-206ENST00000632421 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
PHACTR4-206ENST00000632421 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
PHACTR4-206ENST00000632421 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms