RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
GPC3-204ENST00000631057 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
GPC3-204ENST00000631057 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
GPC3-204ENST00000631057 CRCT1Q9UGL9 99 aa3.19□□□□□ -1.9
GPC3-204ENST00000631057 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
GPC3-204ENST00000631057 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
GPC3-204ENST00000631057 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
GPC3-204ENST00000631057 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
GPC3-204ENST00000631057 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
GPC3-204ENST00000631057 FSIP2Q5CZC0 6907 aa3.09□□□□□ -1.92
GPC3-204ENST00000631057 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
GPC3-204ENST00000631057 USH2AO75445 5202 aa3.02□□□□□ -1.93
GPC3-204ENST00000631057 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
GPC3-204ENST00000631057 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
GPC3-204ENST00000631057 KRTAP19-6Q3LI70 58 aa2.95□□□□□ -1.94
GPC3-204ENST00000631057 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
GPC3-204ENST00000631057 INE1O15225 51 aa2.91□□□□□ -1.94
GPC3-204ENST00000631057 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
GPC3-204ENST00000631057 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
GPC3-204ENST00000631057 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
GPC3-204ENST00000631057 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
GPC3-204ENST00000631057 KMT2DO14686 5537 aa2.85□□□□□ -1.95
GPC3-204ENST00000631057 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
GPC3-204ENST00000631057 FCGBPQ9Y6R7 5405 aaPredicted RBP2.84□□□□□ -1.95
GPC3-204ENST00000631057 MT1EP04732 61 aa2.82□□□□□ -1.96
GPC3-204ENST00000631057 MT1LQ93083 61 aa2.81□□□□□ -1.96
GPC3-204ENST00000631057 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
GPC3-204ENST00000631057 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
GPC3-204ENST00000631057 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
GPC3-204ENST00000631057 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
GPC3-204ENST00000631057 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
GPC3-204ENST00000631057 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
GPC3-204ENST00000631057 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
GPC3-204ENST00000631057 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
GPC3-204ENST00000631057 MT1GP13640 62 aa2.65□□□□□ -1.99
GPC3-204ENST00000631057 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
GPC3-204ENST00000631057 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
GPC3-204ENST00000631057 MT1MQ8N339 61 aa2.64□□□□□ -1.99
GPC3-204ENST00000631057 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
GPC3-204ENST00000631057 NEBP20929 6669 aa2.6□□□□□ -1.99
GPC3-204ENST00000631057 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
GPC3-204ENST00000631057 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
GPC3-204ENST00000631057 MUC12Q9UKN1 5478 aa2.56□□□□□ -2
GPC3-204ENST00000631057 MDN1Q9NU22 5596 aa2.53□□□□□ -2.01
GPC3-204ENST00000631057 SPRR2EP22531 72 aa2.47□□□□□ -2.01
GPC3-204ENST00000631057 SPRR2BP35325 72 aa2.47□□□□□ -2.01
GPC3-204ENST00000631057 SPRR2AP35326 72 aa2.47□□□□□ -2.01
GPC3-204ENST00000631057 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
GPC3-204ENST00000631057 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
GPC3-204ENST00000631057 MT1AP04731 61 aa2.39□□□□□ -2.03
GPC3-204ENST00000631057 SPRR2DP22532 72 aa2.39□□□□□ -2.03
GPC3-204ENST00000631057 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
GPC3-204ENST00000631057 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
GPC3-204ENST00000631057 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
GPC3-204ENST00000631057 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
GPC3-204ENST00000631057 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
GPC3-204ENST00000631057 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
GPC3-204ENST00000631057 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
GPC3-204ENST00000631057 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
GPC3-204ENST00000631057 PRM1P04553 51 aa2.11□□□□□ -2.07
GPC3-204ENST00000631057 MT4P47944 62 aa2.1□□□□□ -2.07
GPC3-204ENST00000631057 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
GPC3-204ENST00000631057 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
GPC3-204ENST00000631057 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
GPC3-204ENST00000631057 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
GPC3-204ENST00000631057 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
GPC3-204ENST00000631057 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
GPC3-204ENST00000631057 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
GPC3-204ENST00000631057 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
GPC3-204ENST00000631057 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
GPC3-204ENST00000631057 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
GPC3-204ENST00000631057 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
GPC3-204ENST00000631057 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
GPC3-204ENST00000631057 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
GPC3-204ENST00000631057 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
GPC3-204ENST00000631057 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
GPC3-204ENST00000631057 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 8 ms