RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	KRTAP12-3	P60328	96 aa		9.38	□□□□□ -0.91
UBE3A-222	ENST00000630907	KRTAP20-1	Q3LI63	56 aa		9.38	□□□□□ -0.91
UBE3A-222	ENST00000630907	LCE5A	Q5TCM9	118 aa		9.35	□□□□□ -0.91
UBE3A-222	ENST00000630907	KRTAP2-3	P0C7H8	128 aa		9.31	□□□□□ -0.92
UBE3A-222	ENST00000630907	KRTAP2-4	Q9BYR9	128 aa		9.31	□□□□□ -0.92
UBE3A-222	ENST00000630907	MT1L	Q93083	61 aa		9.3	□□□□□ -0.92
UBE3A-222	ENST00000630907	MT1G	P13640	62 aa		9.27	□□□□□ -0.93
UBE3A-222	ENST00000630907	PP632	Q6XCG6	107 aa		9.2	□□□□□ -0.94
UBE3A-222	ENST00000630907	LCE3B	Q5TA77	95 aa		9.13	□□□□□ -0.95
UBE3A-222	ENST00000630907	MT1M	Q8N339	61 aa		9.12	□□□□□ -0.95
UBE3A-222	ENST00000630907	KRTAP2-2	Q9BYT5	123 aa		9.05	□□□□□ -0.96
UBE3A-222	ENST00000630907	KRTAP2-1	Q9BYU5	128 aa		9.05	□□□□□ -0.96
UBE3A-222	ENST00000630907	PMAIP1	Q13794	54 aa		9	□□□□□ -0.97
UBE3A-222	ENST00000630907	KRTAP15-1	Q3LI76	137 aa		8.98	□□□□□ -0.97
UBE3A-222	ENST00000630907	DST	Q03001	7570 aa	Known RBP	8.93	□□□□□ -0.98
UBE3A-222	ENST00000630907	KRTAP19-4	Q3LI73	84 aa		8.89	□□□□□ -0.99
UBE3A-222	ENST00000630907	KRTAP4-3	Q9BYR4	195 aa		8.89	□□□□□ -0.99
UBE3A-222	ENST00000630907	KRTAP4-7	Q9BYR0	210 aa		8.87	□□□□□ -0.99
UBE3A-222	ENST00000630907	PRO0628	Q9UI54	55 aa		8.85	□□□□□ -0.99
UBE3A-222	ENST00000630907	LCE3C	Q5T5A8	94 aa		8.69	□□□□□ -1.02
UBE3A-222	ENST00000630907	PRAC1	Q96KF2	57 aa		8.52	□□□□□ -1.05
UBE3A-222	ENST00000630907	LOC100996750	A0A140TA64	210 aa		8.38	□□□□□ -1.07
UBE3A-222	ENST00000630907	LCE4A	Q5TA78	99 aa		8.38	□□□□□ -1.07
UBE3A-222	ENST00000630907	KRTAP4-9	Q9BYQ8	210 aa		8.33	□□□□□ -1.08
UBE3A-222	ENST00000630907	KRTAP5-4	Q6L8H1	288 aa		8.32	□□□□□ -1.08
UBE3A-222	ENST00000630907	KTN1-AS1	Q86SY8	53 aa		8.32	□□□□□ -1.08
UBE3A-222	ENST00000630907	KRTAP5-5	Q701N2	237 aa	Predicted RBP	8.29	□□□□□ -1.08
UBE3A-222	ENST00000630907	MT4	P47944	62 aa		8.2	□□□□□ -1.1
UBE3A-222	ENST00000630907	LCE1D	Q5T752	114 aa		8.2	□□□□□ -1.1
UBE3A-222	ENST00000630907	KRTAP9-6	A8MVA2	160 aa		8.17	□□□□□ -1.1
UBE3A-222	ENST00000630907	HMCN1	Q96RW7	5635 aa		8.05	□□□□□ -1.12
UBE3A-222	ENST00000630907	KRTAP4-6	Q9BYQ5	205 aa		8.03	□□□□□ -1.12
UBE3A-222	ENST00000630907	KRTAP12-4	P60329	112 aa		7.95	□□□□□ -1.14
UBE3A-222	ENST00000630907	SYNE1	Q8NF91	8797 aa	Known RBP	7.94	□□□□□ -1.14
UBE3A-222	ENST00000630907	MT1A	P04731	61 aa		7.92	□□□□□ -1.14
UBE3A-222	ENST00000630907	SVIP	Q8NHG7	77 aa		7.91	□□□□□ -1.14
UBE3A-222	ENST00000630907	SPRR5	A0A1B0GTR4	108 aa		7.86	□□□□□ -1.15
UBE3A-222	ENST00000630907	KRTAP6-1	Q3LI64	71 aa		7.83	□□□□□ -1.16
UBE3A-222	ENST00000630907	KRTAP20-2	Q3LI61	65 aa		7.82	□□□□□ -1.16
UBE3A-222	ENST00000630907	GPR98	Q8WXG9	6306 aa		7.64	□□□□□ -1.19
UBE3A-222	ENST00000630907	KRTAP9-4	Q9BYQ2	154 aa		7.6	□□□□□ -1.19
UBE3A-222	ENST00000630907	AHNAK2	Q8IVF2	5795 aa		7.6	□□□□□ -1.19
UBE3A-222	ENST00000630907	KRTAP5-3	Q6L8H2	238 aa		7.56	□□□□□ -1.2
UBE3A-222	ENST00000630907	KRTAP5-2	Q701N4	177 aa		7.4	□□□□□ -1.22
UBE3A-222	ENST00000630907	KRTAP6-2	Q3LI66	62 aa		7.37	□□□□□ -1.23
UBE3A-222	ENST00000630907	KRTAP5-10	Q6L8G5	202 aa		7.3	□□□□□ -1.24
UBE3A-222	ENST00000630907	MT3	P25713	68 aa		7.23	□□□□□ -1.25
UBE3A-222	ENST00000630907	LUZP6	Q538Z0	58 aa		7.11	□□□□□ -1.27
UBE3A-222	ENST00000630907	KRTAP4-11	Q9BYQ6	195 aa		6.99	□□□□□ -1.29
UBE3A-222	ENST00000630907	KRTAP5-7	Q6L8G8	165 aa		6.93	□□□□□ -1.3
UBE3A-222	ENST00000630907	OBSCN	Q5VST9	7968 aa		6.77	□□□□□ -1.33
UBE3A-222	ENST00000630907	KRTAP5-8	O75690	187 aa		6.73	□□□□□ -1.33
UBE3A-222	ENST00000630907	KRTAP4-12	Q9BQ66	201 aa		6.59	□□□□□ -1.35
UBE3A-222	ENST00000630907	KRTAP5-1	Q6L8H4	278 aa		6.52	□□□□□ -1.37
UBE3A-222	ENST00000630907	LCE1E	Q5T753	118 aa		6.48	□□□□□ -1.37
UBE3A-222	ENST00000630907	MUC5AC	P98088	5654 aa		6.45	□□□□□ -1.38
UBE3A-222	ENST00000630907		H3BS24	57 aa		6.43	□□□□□ -1.38
UBE3A-222	ENST00000630907	LCE3D	Q9BYE3	92 aa		6.39	□□□□□ -1.39
UBE3A-222	ENST00000630907	KRTAP9-9	Q9BYP9	154 aa		6.34	□□□□□ -1.39
UBE3A-222	ENST00000630907	NDUFAF8	A1L188	74 aa		6.29	□□□□□ -1.4
UBE3A-222	ENST00000630907	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.15	□□□□□ -1.42
UBE3A-222	ENST00000630907	AHNAK	Q09666	5890 aa	Known RBP	6.14	□□□□□ -1.43
UBE3A-222	ENST00000630907	LCE3E	Q5T5B0	92 aa		6.13	□□□□□ -1.43
UBE3A-222	ENST00000630907	LCE1B	Q5T7P3	118 aa		6.07	□□□□□ -1.44
UBE3A-222	ENST00000630907	KRTAP4-2	Q9BYR5	136 aa		6.06	□□□□□ -1.44
UBE3A-222	ENST00000630907	LCE1C	Q5T751	118 aa		6.01	□□□□□ -1.45
UBE3A-222	ENST00000630907	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.54	□□□□□ -1.52
UBE3A-222	ENST00000630907	KRTAP5-11	Q6L8G4	156 aa		5.38	□□□□□ -1.55
UBE3A-222	ENST00000630907		A0A0A0MQY5	61 aa		5.3	□□□□□ -1.56
UBE3A-222	ENST00000630907	INE1	O15225	51 aa		5.17	□□□□□ -1.58
UBE3A-222	ENST00000630907	KRTAP21-2	Q3LI59	83 aa		5.15	□□□□□ -1.59
UBE3A-222	ENST00000630907	LCE1F	Q5T754	118 aa		5.1	□□□□□ -1.59
UBE3A-222	ENST00000630907	PRM1	P04553	51 aa		4.94	□□□□□ -1.62
UBE3A-222	ENST00000630907	KRTAP4-4	Q9BYR3	166 aa		4.64	□□□□□ -1.67
UBE3A-222	ENST00000630907	PHGR1	C9JFL3	82 aa		4.63	□□□□□ -1.67
UBE3A-222	ENST00000630907	MUC19	Q7Z5P9	8384 aa		4.16	□□□□□ -1.74
UBE3A-222	ENST00000630907	KRTAP21-1	Q3LI58	79 aa		3.2	□□□□□ -1.9
UBE3A-222	ENST00000630907	MUC16	Q8WXI7	14507 aa		3	□□□□□ -1.93

Retrieved 78 of 20,778 RNA–protein pairs in 72.1 ms