RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
CDK7-215ENST00000629350 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
CDK7-215ENST00000629350 SPRR2DP22532 72 aa5.61□□□□□ -1.51
CDK7-215ENST00000629350 A0A1B0GU33 70 aa5.6□□□□□ -1.51
CDK7-215ENST00000629350 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
CDK7-215ENST00000629350 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
CDK7-215ENST00000629350 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
CDK7-215ENST00000629350 V9GYY9 64 aa5.53□□□□□ -1.52
CDK7-215ENST00000629350 A0A0D9SG42 100 aa5.52□□□□□ -1.53
CDK7-215ENST00000629350 PSPHP1O15172 72 aa5.52□□□□□ -1.53
CDK7-215ENST00000629350 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
CDK7-215ENST00000629350 Q1T7F1 81 aa5.51□□□□□ -1.53
CDK7-215ENST00000629350 A8MU10 97 aa5.44□□□□□ -1.54
CDK7-215ENST00000629350 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
CDK7-215ENST00000629350 UQCR11O14957 56 aa5.42□□□□□ -1.54
CDK7-215ENST00000629350 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
CDK7-215ENST00000629350 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
CDK7-215ENST00000629350 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
CDK7-215ENST00000629350 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
CDK7-215ENST00000629350 MT1EP04732 61 aa5.36□□□□□ -1.55
CDK7-215ENST00000629350 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
CDK7-215ENST00000629350 A6NED7 52 aa5.35□□□□□ -1.55
CDK7-215ENST00000629350 KRTAP12-1P59990 96 aa5.34□□□□□ -1.55
CDK7-215ENST00000629350 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
CDK7-215ENST00000629350 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
CDK7-215ENST00000629350 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
CDK7-215ENST00000629350 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
CDK7-215ENST00000629350 K7ERS5 55 aa5.19□□□□□ -1.58
CDK7-215ENST00000629350 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
CDK7-215ENST00000629350 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
CDK7-215ENST00000629350 MT1MQ8N339 61 aa5.1□□□□□ -1.59
CDK7-215ENST00000629350 MT1LQ93083 61 aa5.1□□□□□ -1.59
CDK7-215ENST00000629350 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
CDK7-215ENST00000629350 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
CDK7-215ENST00000629350 MT1GP13640 62 aa5.08□□□□□ -1.6
CDK7-215ENST00000629350 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
CDK7-215ENST00000629350 BRK1Q8WUW1 75 aa5.05□□□□□ -1.6
CDK7-215ENST00000629350 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
CDK7-215ENST00000629350 TNP1P09430 55 aa4.99□□□□□ -1.61
CDK7-215ENST00000629350 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
CDK7-215ENST00000629350 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
CDK7-215ENST00000629350 MT4P47944 62 aa4.95□□□□□ -1.62
CDK7-215ENST00000629350 ROMO1P60602 79 aa4.9□□□□□ -1.63
CDK7-215ENST00000629350 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
CDK7-215ENST00000629350 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
CDK7-215ENST00000629350 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
CDK7-215ENST00000629350 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
CDK7-215ENST00000629350 KRTAP4-4Q9BYR3 166 aa4.71□□□□□ -1.66
CDK7-215ENST00000629350 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
CDK7-215ENST00000629350 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
CDK7-215ENST00000629350 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
CDK7-215ENST00000629350 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CDK7-215ENST00000629350 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
CDK7-215ENST00000629350 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
CDK7-215ENST00000629350 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
CDK7-215ENST00000629350 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
CDK7-215ENST00000629350 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
CDK7-215ENST00000629350 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
CDK7-215ENST00000629350 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
CDK7-215ENST00000629350 MT1AP04731 61 aa4.31□□□□□ -1.72
CDK7-215ENST00000629350 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
CDK7-215ENST00000629350 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
CDK7-215ENST00000629350 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
CDK7-215ENST00000629350 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
CDK7-215ENST00000629350 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
CDK7-215ENST00000629350 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
CDK7-215ENST00000629350 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
CDK7-215ENST00000629350 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
CDK7-215ENST00000629350 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
CDK7-215ENST00000629350 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
CDK7-215ENST00000629350 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CDK7-215ENST00000629350 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CDK7-215ENST00000629350 INE1O15225 51 aa2.74□□□□□ -1.97
CDK7-215ENST00000629350 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
CDK7-215ENST00000629350 PRM1P04553 51 aa2.56□□□□□ -2
CDK7-215ENST00000629350 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
CDK7-215ENST00000629350 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms