RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 A8MU10 97 aa6.43□□□□□ -1.38
SMN2-215ENST00000628696 KRTAP5-7Q6L8G8 165 aa6.4□□□□□ -1.38
SMN2-215ENST00000628696 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
SMN2-215ENST00000628696 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
SMN2-215ENST00000628696 A0A1B0GU69 56 aa6.38□□□□□ -1.39
SMN2-215ENST00000628696 KRTAP20-2Q3LI61 65 aa6.31□□□□□ -1.4
SMN2-215ENST00000628696 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
SMN2-215ENST00000628696 COX7CP15954 63 aa6.28□□□□□ -1.4
SMN2-215ENST00000628696 H7BZZ5 65 aa6.26□□□□□ -1.41
SMN2-215ENST00000628696 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
SMN2-215ENST00000628696 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
SMN2-215ENST00000628696 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
SMN2-215ENST00000628696 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
SMN2-215ENST00000628696 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
SMN2-215ENST00000628696 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
SMN2-215ENST00000628696 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
SMN2-215ENST00000628696 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
SMN2-215ENST00000628696 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
SMN2-215ENST00000628696 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
SMN2-215ENST00000628696 LINC01558Q9Y6Z2 57 aa5.9□□□□□ -1.46
SMN2-215ENST00000628696 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
SMN2-215ENST00000628696 UQCR11O14957 56 aa5.84□□□□□ -1.47
SMN2-215ENST00000628696 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
SMN2-215ENST00000628696 PCP4P48539 62 aa5.82□□□□□ -1.48
SMN2-215ENST00000628696 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
SMN2-215ENST00000628696 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
SMN2-215ENST00000628696 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
SMN2-215ENST00000628696 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
SMN2-215ENST00000628696 KRTAP5-2Q701N4 177 aa5.74□□□□□ -1.49
SMN2-215ENST00000628696 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
SMN2-215ENST00000628696 MT1AP04731 61 aa5.7□□□□□ -1.5
SMN2-215ENST00000628696 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
SMN2-215ENST00000628696 K7ERS5 55 aa5.67□□□□□ -1.5
SMN2-215ENST00000628696 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
SMN2-215ENST00000628696 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
SMN2-215ENST00000628696 AHNAKQ09666 5890 aaKnown RBP5.6□□□□□ -1.51
SMN2-215ENST00000628696 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
SMN2-215ENST00000628696 MUC5ACP98088 5654 aa5.56□□□□□ -1.52
SMN2-215ENST00000628696 MUC5BQ9HC84 5762 aaPredicted RBP5.54□□□□□ -1.52
SMN2-215ENST00000628696 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
SMN2-215ENST00000628696 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
SMN2-215ENST00000628696 TMEM258P61165 79 aa5.49□□□□□ -1.53
SMN2-215ENST00000628696 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
SMN2-215ENST00000628696 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
SMN2-215ENST00000628696 PSPHP1O15172 72 aa5.4□□□□□ -1.54
SMN2-215ENST00000628696 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
SMN2-215ENST00000628696 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
SMN2-215ENST00000628696 V9GYY9 64 aa5.3□□□□□ -1.56
SMN2-215ENST00000628696 Q1T7F1 81 aa5.29□□□□□ -1.56
SMN2-215ENST00000628696 MT3P25713 68 aa5.24□□□□□ -1.57
SMN2-215ENST00000628696 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
SMN2-215ENST00000628696 ROMO1P60602 79 aa5.2□□□□□ -1.58
SMN2-215ENST00000628696 A6NED7 52 aa5.19□□□□□ -1.58
SMN2-215ENST00000628696 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
SMN2-215ENST00000628696 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
SMN2-215ENST00000628696 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
SMN2-215ENST00000628696 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
SMN2-215ENST00000628696 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
SMN2-215ENST00000628696 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
SMN2-215ENST00000628696 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
SMN2-215ENST00000628696 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
SMN2-215ENST00000628696 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
SMN2-215ENST00000628696 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
SMN2-215ENST00000628696 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
SMN2-215ENST00000628696 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
SMN2-215ENST00000628696 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
SMN2-215ENST00000628696 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
SMN2-215ENST00000628696 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
SMN2-215ENST00000628696 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SMN2-215ENST00000628696 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
SMN2-215ENST00000628696 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
SMN2-215ENST00000628696 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SMN2-215ENST00000628696 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
SMN2-215ENST00000628696 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SMN2-215ENST00000628696 PRM1P04553 51 aa2.65□□□□□ -1.99
SMN2-215ENST00000628696 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
SMN2-215ENST00000628696 INE1O15225 51 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 86.3 ms