RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 TMEM258P61165 79 aa6.05□□□□□ -1.44
SPTAN1-214ENST00000628614 UQCR11O14957 56 aa6.02□□□□□ -1.45
SPTAN1-214ENST00000628614 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
SPTAN1-214ENST00000628614 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
SPTAN1-214ENST00000628614 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
SPTAN1-214ENST00000628614 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
SPTAN1-214ENST00000628614 GPR98Q8WXG9 6306 aa5.89□□□□□ -1.47
SPTAN1-214ENST00000628614 MT4P47944 62 aa5.89□□□□□ -1.47
SPTAN1-214ENST00000628614 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
SPTAN1-214ENST00000628614 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
SPTAN1-214ENST00000628614 MIR22HGQ0VDD5 57 aa5.86□□□□□ -1.47
SPTAN1-214ENST00000628614 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
SPTAN1-214ENST00000628614 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
SPTAN1-214ENST00000628614 K7ERS5 55 aa5.8□□□□□ -1.48
SPTAN1-214ENST00000628614 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
SPTAN1-214ENST00000628614 V9GYY9 64 aa5.76□□□□□ -1.49
SPTAN1-214ENST00000628614 PSPHP1O15172 72 aa5.71□□□□□ -1.5
SPTAN1-214ENST00000628614 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
SPTAN1-214ENST00000628614 Q1T7F1 81 aa5.69□□□□□ -1.5
SPTAN1-214ENST00000628614 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
SPTAN1-214ENST00000628614 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
SPTAN1-214ENST00000628614 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
SPTAN1-214ENST00000628614 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
SPTAN1-214ENST00000628614 KRTAP5-10Q6L8G5 202 aa5.56□□□□□ -1.52
SPTAN1-214ENST00000628614 A6NED7 52 aa5.54□□□□□ -1.52
SPTAN1-214ENST00000628614 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
SPTAN1-214ENST00000628614 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
SPTAN1-214ENST00000628614 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
SPTAN1-214ENST00000628614 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
SPTAN1-214ENST00000628614 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
SPTAN1-214ENST00000628614 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
SPTAN1-214ENST00000628614 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
SPTAN1-214ENST00000628614 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
SPTAN1-214ENST00000628614 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
SPTAN1-214ENST00000628614 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
SPTAN1-214ENST00000628614 ROMO1P60602 79 aa5.37□□□□□ -1.55
SPTAN1-214ENST00000628614 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
SPTAN1-214ENST00000628614 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
SPTAN1-214ENST00000628614 MT1AP04731 61 aa5.21□□□□□ -1.58
SPTAN1-214ENST00000628614 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
SPTAN1-214ENST00000628614 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
SPTAN1-214ENST00000628614 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
SPTAN1-214ENST00000628614 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
SPTAN1-214ENST00000628614 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
SPTAN1-214ENST00000628614 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
SPTAN1-214ENST00000628614 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
SPTAN1-214ENST00000628614 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
SPTAN1-214ENST00000628614 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
SPTAN1-214ENST00000628614 MT3P25713 68 aa4.78□□□□□ -1.64
SPTAN1-214ENST00000628614 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
SPTAN1-214ENST00000628614 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
SPTAN1-214ENST00000628614 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
SPTAN1-214ENST00000628614 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
SPTAN1-214ENST00000628614 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
SPTAN1-214ENST00000628614 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
SPTAN1-214ENST00000628614 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
SPTAN1-214ENST00000628614 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
SPTAN1-214ENST00000628614 H3BS24 57 aa4.36□□□□□ -1.71
SPTAN1-214ENST00000628614 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SPTAN1-214ENST00000628614 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
SPTAN1-214ENST00000628614 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
SPTAN1-214ENST00000628614 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
SPTAN1-214ENST00000628614 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SPTAN1-214ENST00000628614 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
SPTAN1-214ENST00000628614 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
SPTAN1-214ENST00000628614 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
SPTAN1-214ENST00000628614 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
SPTAN1-214ENST00000628614 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SPTAN1-214ENST00000628614 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
SPTAN1-214ENST00000628614 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
SPTAN1-214ENST00000628614 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
SPTAN1-214ENST00000628614 INE1O15225 51 aa3.39□□□□□ -1.87
SPTAN1-214ENST00000628614 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SPTAN1-214ENST00000628614 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
SPTAN1-214ENST00000628614 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
SPTAN1-214ENST00000628614 PRM1P04553 51 aa2.73□□□□□ -1.97
SPTAN1-214ENST00000628614 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
SPTAN1-214ENST00000628614 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms