RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
NRXN1-228ENST00000628364 MT1GP13640 62 aa8.88□□□□□ -0.99
NRXN1-228ENST00000628364 KRTAP19-3Q7Z4W3 81 aa8.87□□□□□ -0.99
NRXN1-228ENST00000628364 MT1MQ8N339 61 aa8.82□□□□□ -1
NRXN1-228ENST00000628364 KRTAP4-3Q9BYR4 195 aa8.76□□□□□ -1.01
NRXN1-228ENST00000628364 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
NRXN1-228ENST00000628364 LOC100996750A0A140TA64 210 aa8.69□□□□□ -1.02
NRXN1-228ENST00000628364 LCE5AQ5TCM9 118 aa8.58□□□□□ -1.04
NRXN1-228ENST00000628364 SPRR2FQ96RM1 72 aa8.56□□□□□ -1.04
NRXN1-228ENST00000628364 MUC12Q9UKN1 5478 aa8.54□□□□□ -1.04
NRXN1-228ENST00000628364 CRCT1Q9UGL9 99 aa8.41□□□□□ -1.06
NRXN1-228ENST00000628364 MACF1Q9UPN3 7388 aaKnown RBP8.26□□□□□ -1.09
NRXN1-228ENST00000628364 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
NRXN1-228ENST00000628364 KRTAP5-9P26371 169 aa8.09□□□□□ -1.11
NRXN1-228ENST00000628364 DSTQ03001 7570 aaKnown RBP8.06□□□□□ -1.12
NRXN1-228ENST00000628364 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
NRXN1-228ENST00000628364 KRTAP12-4P60329 112 aa7.99□□□□□ -1.13
NRXN1-228ENST00000628364 LCE3BQ5TA77 95 aa7.98□□□□□ -1.13
NRXN1-228ENST00000628364 MT1AP04731 61 aa7.95□□□□□ -1.14
NRXN1-228ENST00000628364 KRTAP6-1Q3LI64 71 aa7.92□□□□□ -1.14
NRXN1-228ENST00000628364 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
NRXN1-228ENST00000628364 SPRR2EP22531 72 aa7.84□□□□□ -1.15
NRXN1-228ENST00000628364 SPRR2BP35325 72 aa7.84□□□□□ -1.15
NRXN1-228ENST00000628364 SPRR2AP35326 72 aa7.84□□□□□ -1.15
NRXN1-228ENST00000628364 KRTAP5-5Q701N2 237 aaPredicted RBP7.83□□□□□ -1.16
NRXN1-228ENST00000628364 MDN1Q9NU22 5596 aa7.79□□□□□ -1.16
NRXN1-228ENST00000628364 KRTAP4-9Q9BYQ8 210 aa7.7□□□□□ -1.18
NRXN1-228ENST00000628364 LCE3DQ9BYE3 92 aa7.59□□□□□ -1.19
NRXN1-228ENST00000628364 SPRR2DP22532 72 aa7.53□□□□□ -1.2
NRXN1-228ENST00000628364 SYNE1Q8NF91 8797 aaKnown RBP7.52□□□□□ -1.21
NRXN1-228ENST00000628364 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
NRXN1-228ENST00000628364 LCE3EQ5T5B0 92 aa7.49□□□□□ -1.21
NRXN1-228ENST00000628364 KRTAP6-3Q3LI67 103 aa7.48□□□□□ -1.21
NRXN1-228ENST00000628364 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
NRXN1-228ENST00000628364 MT3P25713 68 aa7.18□□□□□ -1.26
NRXN1-228ENST00000628364 KRTAP6-2Q3LI66 62 aa7.13□□□□□ -1.27
NRXN1-228ENST00000628364 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
NRXN1-228ENST00000628364 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.28
NRXN1-228ENST00000628364 PRM1P04553 51 aa7.01□□□□□ -1.29
NRXN1-228ENST00000628364 KRTAP5-4Q6L8H1 288 aa6.99□□□□□ -1.29
NRXN1-228ENST00000628364 NEBP20929 6669 aa6.78□□□□□ -1.32
NRXN1-228ENST00000628364 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
NRXN1-228ENST00000628364 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
NRXN1-228ENST00000628364 MT4P47944 62 aa6.55□□□□□ -1.36
NRXN1-228ENST00000628364 OBSCNQ5VST9 7968 aa6.54□□□□□ -1.36
NRXN1-228ENST00000628364 KRTAP20-2Q3LI61 65 aa6.52□□□□□ -1.36
NRXN1-228ENST00000628364 KRTAP5-2Q701N4 177 aa6.51□□□□□ -1.37
NRXN1-228ENST00000628364 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
NRXN1-228ENST00000628364 KRTAP20-1Q3LI63 56 aa6.26□□□□□ -1.41
NRXN1-228ENST00000628364 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
NRXN1-228ENST00000628364 LCE1DQ5T752 114 aa6.22□□□□□ -1.41
NRXN1-228ENST00000628364 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.42
NRXN1-228ENST00000628364 LCE1EQ5T753 118 aa5.96□□□□□ -1.45
NRXN1-228ENST00000628364 MUC5ACP98088 5654 aa5.83□□□□□ -1.48
NRXN1-228ENST00000628364 LCE1BQ5T7P3 118 aa5.69□□□□□ -1.5
NRXN1-228ENST00000628364 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
NRXN1-228ENST00000628364 LCE1CQ5T751 118 aa5.59□□□□□ -1.51
NRXN1-228ENST00000628364 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
NRXN1-228ENST00000628364 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
NRXN1-228ENST00000628364 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
NRXN1-228ENST00000628364 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.29□□□□□ -1.56
NRXN1-228ENST00000628364 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
NRXN1-228ENST00000628364 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
NRXN1-228ENST00000628364 KRTAP21-2Q3LI59 83 aa5.15□□□□□ -1.58
NRXN1-228ENST00000628364 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
NRXN1-228ENST00000628364 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
NRXN1-228ENST00000628364 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
NRXN1-228ENST00000628364 KRTAP21-1Q3LI58 79 aa4.45□□□□□ -1.7
NRXN1-228ENST00000628364 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
NRXN1-228ENST00000628364 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
NRXN1-228ENST00000628364 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
NRXN1-228ENST00000628364 PHGR1C9JFL3 82 aa4.14□□□□□ -1.75
NRXN1-228ENST00000628364 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
NRXN1-228ENST00000628364 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
NRXN1-228ENST00000628364 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
NRXN1-228ENST00000628364 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
NRXN1-228ENST00000628364 MUC16Q8WXI7 14507 aa2.76□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 1300 ms